Neptunomonas japonica: NEJAP_3390
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Entry
NEJAP_3390 CDS
T07060
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
njp
Neptunomonas japonica
Pathway
njp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
njp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NEJAP_3390 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
njp03021
]
NEJAP_3390 (rpoA)
03400 DNA repair and recombination proteins [BR:
njp03400
]
NEJAP_3390 (rpoA)
Enzymes [BR:
njp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NEJAP_3390 (rpoA)
Transcription machinery [BR:
njp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NEJAP_3390 (rpoA)
DNA repair and recombination proteins [BR:
njp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NEJAP_3390 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
DUF2490
DUF2125
Motif
Other DBs
NCBI-ProteinID:
BBB31328
UniProt:
A0A7R6PKL1
LinkDB
All DBs
Position
complement(3734357..3735361)
Genome browser
AA seq
334 aa
AA seq
DB search
MQRSVNEFLSPRHIDVQEISNTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAITEVE
IDGVLHEYSTIEGVQEDVIEILLNLKGVAITLHNGEEATLTLSKSGSGAVTAGDIQLNQD
AEIANPDHVIAHLNSGATLNMQLKVTNGRGYVPADTRTNDEDETRAIGRLQMDASYSPVR
RVSYVVESARVEQRTDLDKLVIDIESNGTIDPEECIRRAATILQHQLSVFVDLEDAADQA
KDEPAEPEVDPILLRPVDDLELTVRSANCLKAEQIYYIGDLIQRTEVELLKTPNLGKKSL
TEIKDVLASKGLSLGMRLENWPPASLKNDDKIAS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttctgtaaatgagtttctgagtcctcgtcatattgatgtccaggaaatcagt
aacacacgtgctaaagtgacattggaaccgctagaacgtggtttcggtcatacgttggga
aatgccttacgtcgtatcctactctcttcaatgcctggctgtgccatcactgaagttgag
attgacggtgtcttgcatgaatacagcacaattgaaggtgtgcaggaggatgtcattgag
attcttcttaaccttaaaggcgttgctatcacgctacacaatggcgaagaagcaactctg
acattgagcaaatcaggctcaggtgctgtaacagctggtgatattcagttgaaccaggat
gcagagattgcaaatcccgaccacgtgattgctcacctgaattcaggtgcgactctgaat
atgcagcttaaggtaaccaacggacgtggttatgtgcctgctgacactcgcactaatgac
gaagacgaaactcgtgctattggtcgtctccagatggatgcttcttatagtccggtacgc
cgtgtttcttatgttgtcgaaagtgctcgtgtggagcagcgtactgacctagataagctg
gttattgatatcgagtcaaatggtacgattgatcctgaagagtgcattcgtcgtgcagct
acaatccttcagcatcagttgtctgtttttgttgatcttgaagatgcagctgatcaggcg
aaagatgagcctgcagagccggaagttgatccgattctgttgcgccctgtcgatgatttg
gaattgacggttcgttcggccaactgtctgaaagcagagcagatttactatattggtgat
ctgattcagcgaacagaagttgagctgctgaaaaccccaaatctaggtaagaagtcgctg
acagagattaaagatgtgcttgcttccaaaggtctttctttgggcatgcgtcttgaaaac
tggcctccggctagcctgaagaacgacgataaaatcgcatcgtaa
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