Neptunomonas japonica: NEJAP_3614
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Entry
NEJAP_3614 CDS
T07060
Symbol
truB
Name
(GenBank) tRNA pseudouridine55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
njp
Neptunomonas japonica
Brite
KEGG Orthology (KO) [BR:
njp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
njp03016
]
NEJAP_3614 (truB)
Enzymes [BR:
njp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NEJAP_3614 (truB)
Transfer RNA biogenesis [BR:
njp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NEJAP_3614 (truB)
Prokaryotic type
NEJAP_3614 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BBB31552
UniProt:
A0A7R6PJX2
LinkDB
All DBs
Position
complement(3977817..3978767)
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AA seq
316 aa
AA seq
DB search
MGRRHKGRPVDGIFLLDKPQGVSSNYVLQGVKRIYGAAKAGHTGALDPLATGMLPLTFGE
ATKFSQFLLNADKRYQTTAKLGIRTDSSDADGQVIATADIGEHVTRELIQSLLEEHFTGE
IEQVPSMFSALKHNGQPLYKLARQGIKVEVKRRQVTILSIEILDFRGDEVDLDIRCTKGT
YIRSIVEDLGLYLGCGAHVKVLRRLDSGPYQAQSMITLEQLQEIAAPMTPDEPPQSIQER
LDALLLAPWSAIEDTPLIELEAEQCARVLNGIVIDLDMAAQPLVRIQEKDTGRFLGIGEI
TQEGQLVSRRLMSTNN
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
gtgggccggcgacataaaggccgtccagtggacggcatttttctgcttgataaaccgcag
ggcgtgagctccaattatgttctgcaaggtgtaaagcgcatctatggtgccgcaaaagcg
ggacataccggtgcgcttgatccgctagctacaggcatgcttcctcttacgtttggagaa
gccaccaaattctctcaatttcttctcaatgctgataaacgctatcaaacgactgcaaaa
ctaggtatcagaacagatagcagtgatgccgatggtcaggtcattgcaacagcagatatc
ggtgagcacgttacacgtgagctgattcaatctttgcttgaagagcactttaccggtgag
attgagcaggttccttcgatgttttcagccttgaaacataacggtcagcctttgtataag
ctggcaagacaaggtattaaggttgaagtcaaacgtcgacaagttacgattttaagtatt
gaaattctcgactttcgcggtgacgaggttgatctggatatacgttgtactaaaggcacc
tatattcgctcgattgtagaggatttaggtttgtatcttggctgtggcgcgcacgtaaaa
gtattgcgccgtttagattcagggccctatcaagcacaaagcatgattaccttagagcaa
ctacaagaaatagctgctccaatgacgcctgatgaacccccacaaagcatacaagagcgc
ttagatgcgctattattagcgccgtggtcagcaattgaggatacacctctgattgagctg
gaagcagagcagtgtgcacgtgtgttaaatggcattgtcattgaccttgatatggctgcg
cagccgcttgtaagaatacaagaaaaagatactgggagatttcttggtattggcgagata
actcaggaaggtcagttagtttcaagacggttaatgtcgacaaataactag
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