Neptunomonas japonica: NEJAP_3643
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Entry
NEJAP_3643 CDS
T07060
Symbol
uvrD
Name
(GenBank) DNA helicase II/ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
njp
Neptunomonas japonica
Pathway
njp03420
Nucleotide excision repair
njp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
njp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NEJAP_3643 (uvrD)
03430 Mismatch repair
NEJAP_3643 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
njp03400
]
NEJAP_3643 (uvrD)
Enzymes [BR:
njp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NEJAP_3643 (uvrD)
DNA repair and recombination proteins [BR:
njp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NEJAP_3643 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NEJAP_3643 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_22
AAA_11
CRISPR_Cas6_N
Motif
Other DBs
NCBI-ProteinID:
BBB31581
UniProt:
A0A7R6PLZ4
LinkDB
All DBs
Position
4015601..4017814
Genome browser
AA seq
737 aa
AA seq
DB search
MDVTAIIDGLNDAQRSAVTAPVQNLLILAGAGSGKTRVLVHRIAWLVQTENISPYSIMAV
TFTNKAAREMRGRIETLLGVNPNGMWVGTFHGLAHRILRAHWRDAGLNENFQIMDSEDQL
RLIKRLCKEMSLDDTRWPARQFQWFINAQKDEGLRSRHLERTADPHDITMIRMYEAYEEA
CDRGGMIDFGELLLCCLELLRDRNPSLLQHYQQRFRYLLVDEFQDTNAIQYAWLRLLCGN
DRKLMAVGDDDQSIYGWRGARIENIQNLPEHFPGADTIRLEQNYRSTQTILKAANAVIEN
NRGRLGKELWTDGKDGEKISLYAAFNEQDEARFIVGQIQKWVDEGNLRSESAILYRSNAQ
SRVLEEALIRSGMPYKIYGGHRFYDRLEIKNALAYLRLVSNREDDTAMERIINVPTRGIG
TRTIEIVREQARAENVSMWRAANEVVEYKKLPSRALTALQLFLDLINQIDTDSMGTELHE
QTDHAIQLSGLIDHHKKEKGEKAQSRLENLEELINAAKQFSGQWVASPEEENVNELSAFL
DQAALDAGDAQAADHQDSVQLMTLHSAKGLEFPMVFLGGVEEGLFPHKMSADEPGRMEEE
RRLCYVGITRAMQKLFLTYAESRRMHGQETFNRPSRFIQEIPSELIEEVRLNASVSRPMT
SRNDYNNSSNSKFSPNSVQMDDGTPKLYIGQQVRHQSFGEGIVLNCEGTGPKARIQVNFE
NVGMKWLVLGFAKLEPV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaactgcaataattgatggtttaaacgatgcgcaacgcagcgccgtaacggca
ccggtacaaaacctattaatactggccggtgcaggttcaggaaaaacacgcgtactggtg
catcgtattgcttggctcgtacaaacggagaacatctctccttactccatcatggcagtg
acctttaccaacaaagcggcacgcgaaatgcgtggtcgtatagaaacactgctgggcgtt
aaccccaatggcatgtgggtcggtactttccacggtttggcacatcggatattgcgcgct
cattggcgcgacgcaggccttaatgagaacttccaaataatggatagcgaagatcagcta
cggctgataaaacgtctatgtaaagagatgtcgttggatgatactcgctggcctgcacgt
caattccaatggttcatcaatgcgcaaaaagatgaaggcttacgcagtcgccacttagaa
cgaacagccgatccacatgacatcaccatgattcgtatgtatgaagcttacgaagaagcg
tgtgatcgtggcggaatgattgattttggtgaacttctactttgctgtttagaactgtta
cgcgatcgtaacccatcattgctacaacattatcaacagcgctttcgttacctgctcgtt
gatgagtttcaagacaccaacgccattcaatacgcatggctaagattactctgtggaaat
gaccgcaaacttatggccgtcggtgatgacgatcagtctatctatggttggcgtggtgcg
cgtattgaaaatattcagaacctgccagagcatttccctggggctgacacaatacgtttg
gagcaaaattatcgctcgacacaaaccatcctcaaagcggctaacgccgttattgaaaac
aatcgcgggcgcttaggaaaagaactgtggacagatggcaaagacggagaaaaaatcagt
ctttacgcggccttcaacgagcaagatgaagcacgctttattgtcggccagatccaaaag
tgggttgacgagggcaacctacgctcagaatccgctattctttaccgctcaaacgcccaa
tcccgagttctagaagaagcactcatccgtagcggtatgccctataagatttacggcggt
catcgtttctacgaccgtttagaaattaagaatgccttggcttacctacgcctcgtatcc
aaccgcgaagatgatacagctatggagcgcatcattaatgtgcccacacgcggtatcggt
actcgcacaatcgaaatagttcgcgaacaagccagagcagaaaacgtatcgatgtggcgt
gccgccaatgaagtcgtagagtataaaaagctgccctctcgcgcactgacagcactacaa
ctctttctagatctgattaaccagatcgataccgattcgatgggcacagagttacacgaa
caaacagaccatgcgatccagctcagtggtttaatcgatcatcacaagaaagagaaaggt
gaaaaagcccaatctcgattagaaaaccttgaagaactgattaacgcggccaaacagttt
agcggtcaatgggtcgctagccctgaagaggaaaatgtaaacgagctatctgcctttttg
gatcaagcagctcttgatgcaggtgatgcacaagcagccgaccaccaagatagcgttcag
ctaatgaccttacattcagccaaaggtctagaattcccgatggtttttctcggtggagta
gaagaaggtttatttccacacaagatgtccgctgatgaaccgggtcgtatggaggaagaa
cgcagactctgttatgtcggtattacccgcgctatgcaaaagctgtttttaacttacgcc
gaatcccgtcggatgcatggtcaagaaacgtttaaccgcccttcgcgttttattcaggaa
atcccttctgaactgatcgaagaagtacgcttaaacgctagtgtcagccgtccaatgacc
tcaagaaatgactataacaactcatccaatagcaaatttagcccaaactcggttcaaatg
gatgacggcacccctaaactctatattggtcaacaagtgcgccaccaaagcttcggagaa
ggcatagtcctgaactgcgaaggcacaggccctaaagcccgtatacaggttaattttgaa
aatgtcggcatgaagtggctagtcttgggctttgctaagttagagccggtgtaa
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