Candidatus Nitrospira kreftii: Nkreftii_000454
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Entry
Nkreftii_000454 CDS
T08052
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
nkf
Candidatus Nitrospira kreftii
Pathway
nkf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nkf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Nkreftii_000454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nkf03019
]
Nkreftii_000454
Messenger RNA biogenesis [BR:
nkf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Nkreftii_000454
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
DivIVA
DUF1490
Motif
Other DBs
NCBI-ProteinID:
QPD02680
UniProt:
A0A7S8FBB3
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Position
419982..421625
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AA seq
547 aa
AA seq
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MVREWALRQVVHSHLMVFKKGVTSISTSIVVYIMLSGIVGAVVGAGIFELLRRRMTGAKQ
AEAEGLAKQVVQNAQREAENVLKEARLEAKDLAFKAKSEFEQEQKAKLGELLTLEKRLIQ
REEGFDQKVAALEKRENEARKREVDFTKREEGLLAKESACAKAEREHRDALERVAGMTAD
EAKKQLIVEMESQARLDAVGIAKRTIEEARENAEREAREIITSSIQRVVRDYVSESTISV
VPIPTDAMKGRIIGREGRNIRALEAATGIDLIIDETPEAVIISGFDPLRREIAKVSLERL
MHDGRIHPTRIEEIVEKVKVDIDKLMYEEAEKIIFELGLSDFHPELIKVLGRLKYRTSYG
QNNLYHAREASYICGIMASELGLDVRLARRGALLHDIGKAVSHEEEGPHAMLGAEIAKKY
GESAKIVNAIAAHHEQVEPICPESVLVAAAEALSAARPGARREALESYVKRLEKLESLAT
GHKGVQKAYAIQAGREIRVIVRQEDITDAESFQLSRELAKKIEQELTYPGQIKVTVIRES
RYVEYAK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggtccgtgagtgggcgctccgtcaggttgtgcatagccacctgatggttttcaagaag
ggggtgacttccatttcaacctcaattgtcgtgtacatcatgctttccggtattgtcggc
gccgtagtcggagctgggatattcgagcttctgcgtcgccggatgacaggtgccaaacag
gctgaggcggaggggttggctaaacaggttgtgcagaacgcacaacgcgaggcggagaac
gttctcaaggaagcacggctagaggcgaaggatctggctttcaaggcaaaatccgagttc
gagcaagaacagaaggccaaattgggcgaactcttgacgcttgaaaaacgcctcatccag
agagaagaagggttcgaccaaaaggtcgccgcgctagaaaaaagggagaatgaggctcgc
aaacgcgaggtcgattttacgaaacgagaagaggggcttttggccaaggaatctgcctgc
gcgaaagccgagcgtgagcaccgtgatgcgttggagcgtgtggctgggatgacggcggac
gaggccaagaagcagctgatcgtggagatggaatcgcaggctcgactggacgccgttgga
attgcaaaacggacgatcgaagaggcccgtgagaacgcggagcgggaggcgcgagagatc
attacgtcttcgattcaacgcgtcgttcgagactacgtctcggagtccacgatttcagtg
gttccgatccccaccgatgccatgaaaggccgcatcatcggtcgggaagggcgaaatatc
cgcgcgcttgaggcggcgacgggtatcgatctcatcattgatgaaaccccggaggccgtg
atcatttcaggatttgatccattacgacgagagatcgcaaaggtgtcgttggaacgactg
atgcacgatggccgcatccaccccactcgcattgaagagatcgtcgaaaaagtgaaggtg
gacatcgacaagctgatgtatgaagaggctgagaagattatctttgagctggggctttcc
gactttcatccggaattgatcaaagtgttgggacgtctgaagtatcgaacgagctacgga
cagaataacctctaccatgcccgcgaagcctcctacatttgcggcatcatggcatcggag
ctgggattggatgtcaggttggctcgtcgcggagccctgctccacgatatcggcaaggca
gtcagccatgaagaagaaggaccacacgccatgctgggggctgagattgccaagaaatac
ggggaatcggccaaaatcgtcaatgcgatcgccgcgcatcacgagcaggtggagccaatt
tgtccggagagcgtgttggtcgcggcggccgaagcgttgtcggccgcacgccccggtgca
cgacgagaggcgctggaatcttacgtcaagcggctcgaaaagcttgagtcgctggcgacc
ggacacaagggtgtgcagaaggcatacgccatccaggccgggcgtgaaattcgcgttatt
gtcaggcaagaagacatcaccgatgctgagtcttttcagctgtctcgtgaactggcaaaa
aagattgaacaggagttgacctatccgggacagattaaggtgaccgtcatcagagaaagt
cgatacgtggaatacgccaaatga
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