Candidatus Nitrospira kreftii: Nkreftii_000859
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Entry
Nkreftii_000859 CDS
T08052
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nkf
Candidatus Nitrospira kreftii
Pathway
nkf03420
Nucleotide excision repair
nkf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nkf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Nkreftii_000859
03430 Mismatch repair
Nkreftii_000859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nkf03400
]
Nkreftii_000859
Enzymes [BR:
nkf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Nkreftii_000859
DNA repair and recombination proteins [BR:
nkf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Nkreftii_000859
MMR (mismatch excision repair)
Other MMR factors
Nkreftii_000859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
AAA_12
HHH
Motif
Other DBs
NCBI-ProteinID:
QPD03085
UniProt:
A0A7S8FC30
LinkDB
All DBs
Position
817132..819159
Genome browser
AA seq
675 aa
AA seq
DB search
MEREVKTYVLKRPTEEAGPRKLSIDYAAALNPQQLAAVTAGDGPSLVIAGAGSGKTRTLV
YRVAYLIDSGVDPSNILLLTFTRKSSQEMLERAGDLIGVSSRRVCGGTFHSVANMLLRRH
GRSIGIEPGFTILDRGDAEDLIALMRSQLGLNEKDKRFPRKGTIMEMISKSENTLRSLDE
IILEEFSHFADHSEDLGRLQKAYQTAKRQKQLLDYDDLLVMLRQLLLLDETARANISRQY
RYILVDEYQDTNRLQAEVIRQLATTYQNVMVVGDDSQSIYAFRGATFKNIMEFPLLFPGT
TVYKLEENYRSTQPILNLANCIIEEAAEKYTKRLFTRKIDGPLPSLVEAAGENAQSRFIG
QKILELREEGVPLSEVAVLFRSSFHSFDLEIELSRKGLPFIKRGGVKFIETAHVKDLLAH
VRVVSNPLDTVSWHRVLLLVEGVGPKKAQDLLAAIVKADRPYDVLRGVSGRSGPGLKNLA
NTLESLAGSDDRQPEHQVSHIYEYYLPILKDQYDDYPKRTRDLDHLHTIAEGYQGIDEFL
ADLALEPPDGSTVNVEAGDRDDERMVLSTIHSAKGLEWQCVFVIWVVDGRFPSAYSFLTE
DELEEERRLFYVAVTRAKRHLFLTYPINVYDKTSGMLLSKPSRFLDHVSSNLLDTLALVE
EGGRDGWGMTPDPYY
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggaacgagaagttaaaacctacgtactgaagcgacctactgaggaagctggtccacgc
aagttgtcgatcgactacgcggcggcgctgaatcctcagcaattagccgcagtgacagca
ggtgatggcccgtcgctggtcattgccggtgcgggaagcggcaagactcgtacgctggtc
tatcgtgtggcctatctgatcgattcgggcgtggatccttcgaatattcttctgcttacc
ttcacgcgcaaatcctcacaggaaatgttggagcgggctggcgatttgatcggggtgagt
agtcggcgggtctgcggcgggacgtttcactcggtggccaatatgctgctgcggcggcat
ggccgatcgatcggcatcgaacctggtttcacaattctagatcgcggcgacgcggaagat
ttgatcgccttgatgaggtcacagctggggctcaacgaaaaagacaaacgctttccccgc
aaggggacaatcatggaaatgatcagcaagagcgagaacacgctgcgcagccttgatgag
atcattctggaggagttcagccattttgcggatcattcggaggatctcggccgactccag
aaagcctatcaaaccgccaagcgtcaaaaacagctcttggattacgacgatctgttggtg
atgctgcggcagttgctcttgttagatgagacggctcgcgcgaacatctcccgacagtat
cgctacatccttgtggatgagtaccaagacacgaatcggttgcaggccgaggtcattcga
caactggcgacgacgtatcagaatgtgatggtggtgggcgacgactcgcagtccatctat
gcattccgcggcgcgaccttcaagaacatcatggaattccctctgctgttccccggcacg
acggtctataagctggaagagaactaccgcagcacgcagccgattttgaatctcgcgaac
tgcattatcgaagaggcggcggagaagtatacgaagcggctcttcacgagaaagatcgat
ggcccacttccgtcgctcgtggaggccgccggtgagaatgcgcagtcgcgattcattggg
cagaagattcttgagcttcgcgaggaaggggttccgctcagtgaggtggcagtcctgttt
cgctcgagttttcattcgttcgatctggaaatcgagctctctcgaaaggggctacccttt
attaagcgtgggggggtgaagtttatcgagaccgctcatgtcaaagatttgttggcgcat
gtgcgtgtcgtctcgaacccgctcgatacggtcagttggcatcgcgtgctgctgctggtg
gaaggtgtggggccgaagaaggcgcaggacttgctcgccgcgatcgtgaaagcagaccga
ccatatgatgtgctgcgtggggtgagcgggcgctccgggcctggcctcaagaacttggcg
aataccttggagagcctggctggatcggatgatcgacagcctgaacatcaagtaagccat
atctatgagtattacctcccaattctgaaggaccaatacgacgactacccgaagcggacg
agagatctggatcatctccatacgattgccgaggggtatcagggtattgacgaatttcta
gccgatctagcgttggaaccgccggatggcagtaccgtgaatgtagaggcgggtgaccgg
gatgatgaacgaatggtgctctcgacgattcactccgcgaagggattggagtggcagtgc
gtgtttgtgatctgggtcgtcgacggccggtttccatcagcctattccttcctcaccgag
gacgaactggaggaggaacggcggctcttttacgtggctgtcactcgagccaagcgtcat
ttgtttttgacctatcccatcaacgtgtacgataagaccagcgggatgttgctctcgaag
ccttcaagatttctggaccacgtgtcttcgaacctgctcgacacgcttgctctcgtcgag
gaaggtggacgagatggatgggggatgaccccagatccctactattga
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