Candidatus Nitrospira kreftii: Nkreftii_000981
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Entry
Nkreftii_000981 CDS
T08052
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nkf
Candidatus Nitrospira kreftii
Pathway
nkf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nkf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Nkreftii_000981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nkf03400
]
Nkreftii_000981
Enzymes [BR:
nkf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Nkreftii_000981
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Nkreftii_000981
DNA repair and recombination proteins [BR:
nkf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Nkreftii_000981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
NFACT_N
zf-FPG_IleRS
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
QPD03207
UniProt:
A0A7S8FCB7
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All DBs
Position
923637..924467
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AA seq
276 aa
AA seq
DB search
MPELPEAEVVARQIRTCLLGARLRDVWVGRADIVREGFSSVLWYRDTILQSVQRFGKSVV
LGFVNEQACRYVVAELGMTGLLLFRSVPTKYPQHVHVRLSFEGCREPELRYWNPRRFGRL
SLLDKTGLERYLMRRFGVDPLLVSKQHFVKILRERRGRLKPLLMHQQVIAGIGNIYANEI
LFRAGFHPNMQVSRLSVQKIERLHTIMREVLEEAILSGGSSIRDFFAPDGTEGQYKRRHL
VYGKEGQPCPNRCGHVIRRLQSERSSFICQTCQVSR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccggagttgcctgaagcagaagtcgttgcccgacaaattcgtacgtgcctccttggg
gcgcggttgagggacgtgtgggttgggcgtgcggatattgtgcgtgaaggcttcagcagc
gtactgtggtatcgagataccatcttacagtctgtccagcgattcgggaaaagcgtggtc
ttaggatttgtaaatgaacaggcctgccgctatgtggtggcagagcttgggatgaccggc
ctcctcttgttccggtctgtcccgacgaaatacccacaacacgttcatgtcagactgtcg
tttgagggctgccgtgagccggagttgcggtactggaaccctcgtcggttcggacggctc
tcactgctggacaagaccgggcttgaacgatacctcatgcgccgatttggggtggatccc
cttcttgtctcgaagcagcactttgtcaaaatcctgcgagagcgacgcggtcgactgaag
ccgctcctgatgcatcagcaggtcattgccggtatcgggaacatctatgcaaacgagatt
ctcttcagggccgggtttcatccgaacatgcaggtcagtcggctttcagtgcagaaaata
gaacgtctccacacgattatgcgcgaggtgcttgaggaagcgattctctcaggagggtcg
agcatccgcgatttttttgcgcccgacggcaccgaggggcaatacaagcgccgccatttg
gtgtatgggaaagagggtcaaccctgtccaaatcgttgtggacacgttatccgacgtctc
caaagcgagcgcagttcgttcatatgtcaaacttgtcaggtttcccgatga
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