Candidatus Nitrospira kreftii: Nkreftii_001360
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Entry
Nkreftii_001360 CDS
T08052
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
nkf
Candidatus Nitrospira kreftii
Pathway
nkf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nkf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Nkreftii_001360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nkf03400
]
Nkreftii_001360
DNA repair and recombination proteins [BR:
nkf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Nkreftii_001360
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Nkreftii_001360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Phage_GP58
zf_Tbcl_Rhp7
Motif
Other DBs
NCBI-ProteinID:
QPD03586
UniProt:
A0A7S8IYW1
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Position
1296898..1297656
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AA seq
252 aa
AA seq
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MPLVKTTAIVLRSRKWGDADRIVTFYSKSLGKIRGVARGARRQKSRFGAALEPFSVCRLD
LFEKNGDSLFRISHVDLIRSSRVLREDLSLMDSAARMVNVVAAITPDGDPDPPLFDTLEQ
GLVSLQESGDPPFTALLFQIRLLGLTGFRPQTDHCASCGKTYFVGEPQFSPIAGGLVCQI
CAARQRVRCVALSRGGLAFLQQAIRLTPATVTRLRATGQVRREVEEAIEGYVTVVAGKRL
PAVNFLSVASPG
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcttgtaaaaacgacggcgattgttctgaggagtcgcaagtggggtgatgccgat
agaatcgtgactttttactcgaagagtttgggaaagatacgaggagtagctcgtggtgcc
cgacgccagaagagccgtttcggcgctgctcttgagccattcagcgtgtgtcggttggat
ctgtttgaaaagaatggtgactcgctattccgaatctcacatgttgacctgatcaggtcc
tcccgggtgttgcgagaagacctcagcttaatggattcagcagcgcgaatggtcaacgtc
gtggcagccattaccccagatggagatccggatccgccgttgtttgatacgctggagcag
gggttggtatcgcttcaggaaagtggcgatccacccttcacggcactgctctttcaaatc
cgattgctgggattaacaggcttccgccctcagaccgatcattgtgcttcctgtgggaag
acatatttcgtcggagagcctcaattttcaccgattgccggagggcttgtgtgtcagatt
tgtgcggcacgccaacgtgtgcggtgtgttgcgctttctcgaggaggcctggcatttctt
cagcaagccattcggctgactcctgctaccgtcacgaggttacgagctacgggacaggtg
cggcgcgaagtagaagaggcgatcgaggggtatgtgacggtcgtagctggtaaacggtta
ccagccgtgaactttctgtcggtcgcctcgccgggatga
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