KEGG   Candidatus Nitrospira kreftii: Nkreftii_001713
Entry
Nkreftii_001713   CDS       T08052                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
nkf  Candidatus Nitrospira kreftii
Brite
KEGG Orthology (KO) [BR:nkf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nkf03400]
    Nkreftii_001713
Enzymes [BR:nkf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Nkreftii_001713
    5.6.2.6  RNA 3'-5' helicase
     Nkreftii_001713
DNA repair and recombination proteins [BR:nkf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Nkreftii_001713
SSDB
Motif
Pfam: DEAD_assoc DEAD WH_Lhr WH4_Lhr Helicase_C WH3_Lhr ResIII Cas3-like_C_2 DprA_WH DUF4423
Other DBs
NCBI-ProteinID: QPD03939
UniProt: A0A7S8FDT2
LinkDB
Position
1655392..1659729
AA seq 1445 aa
MHGKIPPMQLSGFHPIISNWFSTSIGQPTDVQVQAWPAIQSGADALIAAPTGSGKTLAAF
LSCIDHLFKQALARELDDHTHVLYVSPLKALSNDIQKNLQKPLAEIGQLALQDGLLMPEL
RVLVRTGDTPMADRQQMLKRPPHILVTTPESLFILLTAEKSRKLLQTVRTVIVDEIHALA
PNKRGAHVALSLERLEALTLVKPQRIGLSATQRPIEMVAEFLVGARGASLVKRETSLVKE
ATNDEIRATNDVRIIDVGHRRELDLAVEVPKDELSAIATNAIWSDVYDRVAELVRQHRST
LVFVNTRRLAERVSHYLEERLKDLGSDVVAAHHGSLSRQIRLSAEERLKSGKTRVVIATA
SLELGIDVGTVDLVCQIGSPRAIATGLQRIGRAGHWINAIPKGRLFAMTRDELVECAALV
RAIRAGVLDQIEIPPAPLDILAQQIVAAAATQTWAEADLFALCRRAYPYRALSRGEFDAV
VRMLADGIATQRGRGLAYLYHDRINHRLKGRRGARLAAITSGGAIPDTANYAVVAEPDGT
VVGSVDEDFAVESLAGDIMLLGNTSWRIKGVEAGKVRVEDAQGAPPNIPFWRGEAPSRTT
ELSAEVAELRRAIADKADSSLSAIQWLRQDCGLDQRGAQQAIEYVLIGKAVLGAVPTQTL
IVAERFFDESGGMQLVIHAPFGGRINKAWGLALRKRFCVTFDFELQAAATDNGLVISLGE
KHSFPLESVFGYLHSKSVREVLVQAVLLAPMFTTRWRWNASRSLALLRFSNGKKVPPQIQ
RMKSEDLLAAIFPDAIACQENLTGERVAREIPDHPLVKETLRDCLTEAMDIEGLTAVLQR
IERGQIRSVAVETPAPSVFSHEILNANPYAFLDDAPLEERRARAVEMRRTLPPDLVGEVG
ALDLEAIDEVVRESWPIVRDADELHDALLTLVWVPSETVIEWQSFLPELIESDRAMELSA
KGWVATEHREGVERVLAGEDDATLTGILQGWMESIGPTTVAELATRLHLPVEPIRSAMVR
LEASGQVLRGRFTRYASRFTSDDMEWCHRRLLARIHRLTIGRLRREIEPVTVVEFMRFVM
QWQHVLPGSRQHGESGLLQVIQQLAGFEAAASSWEPQLLRLRMAKYEPELLDRLCLSGAV
SWGRLSSHPKISQGGDQDRRRIIATSVAPINLFPRDDSEWLLHVFRDDSAVSGAGSHTHL
SAVAQDVRRALGERGASFFADLARETNHLPAEVEGALWELVAAGIVTADGFDNLRALMDP
HRRRAEGRERARRPRYSAGRWSLLRQSHSALSLQPCELTEKVARQLLRRYGIVFRDLLQR
ESLVPSWRDLLVVYRRLELQGEVRGGRFVTGFTGEQFSLPEAVEALRTIRKNSPSLGTEH
EIKLSAADPLNLVGVILPGSRVPAVPTNFLVFKDGALIRTVIGRQHDAALSIDAQTGPAT
ARLPA
NT seq 4338 nt   +upstreamnt  +downstreamnt
atgcatggtaagatcccgcctatgcagctttcggggtttcatccgattatttccaattgg
ttttctacgtccatcgggcagccgaccgacgtccaagtccaggcctggccggccatccaa
tccggagctgatgcgctgattgccgcgccgacgggatccggcaagactctcgcagcattc
ctctcctgtattgaccacctcttcaagcaagccctcgcgcgtgagctcgacgaccacacc
catgtactctatgtttcacctctcaaagcgctgagtaacgacattcagaaaaatcttcag
aagccgctggcagaaatcggacaactggcgctccaggacgggctcctgatgcctgagttg
cgcgtgctggtgcgaaccggcgacacgcccatggctgatcgccagcagatgctcaagcgg
ccacctcatattcttgtcacgacgccagaatcgctgttcatcctattgacggctgagaag
agtcgaaagctcctacagaccgtgcggaccgtgatcgtggacgaaattcacgcgctggcg
ccgaacaagcggggcgcccatgtggcgctgtcgctggagcggctggaagcgttgacgctg
gtgaagccgcaacggatcggcttgtcagcgactcagcgaccgatcgaaatggtggcggag
ttccttgtcggtgccagaggcgcatctctcgtaaagcgtgaaacgtctctcgtgaaagaa
gctacgaacgacgagatacgagcgacgaacgacgtgagaattattgacgtcggccatcgc
cgggagctggatctcgccgtagaagtaccgaaagacgaattgagtgccattgcgacgaat
gccatctggtctgatgtgtacgaccgtgttgcagaactggttcggcagcatcgttccacg
ctcgtatttgtgaatacccgacgccttgcggaacgagtctcccattatctggaagaacgc
ctcaaagatttaggttctgatgtcgtcgccgcgcaccacggcagcctttcccgacagatc
aggctttcggctgaagagcgattgaaaagtggtaagactcgcgtggtcattgccacagcc
tctctggaattgggtatcgacgtaggtacggtcgatcttgtctgtcagatcggctcgccg
agagccattgccactgggctgcaacggatcggtcgtgcaggccactggatcaatgcgatt
cctaaaggccgcctattcgccatgactcgagatgagctcgtagagtgtgccgcgctggta
cgggccattcgcgccggtgttttggaccagattgagattcctccggcaccgctcgatatt
cttgcgcaacagatcgtcgctgccgctgcgacacagacctgggcggaagcagacctgttc
gccctatgtcggcgcgcgtatccctatcgagcgctgtcacgcggggagttcgatgcggta
gtgcgaatgttggcggatgggattgcgacacagcgcgggcgcgggcttgcgtacctctac
cacgaccgcatcaatcatcggctcaagggtcggcggggagcgcggctggcggccatcacg
tcaggcggcgcgatccccgatacggcgaactatgctgtggtagcagaaccggacggtaca
gtggtgggatcggtcgatgaagattttgctgttgaaagtcttgccggtgacattatgttg
cttggtaacacctcatggcgcattaagggagtggaagccggaaaggttcgtgttgaggat
gcacagggagcaccgccgaacattcccttttggcgcggggaggctccctcgcgaacaaca
gagctctccgcagaagtcgccgaacttcggcgggcgattgcggacaaggccgactcgtcg
ttgtcggccattcagtggttgagacaggattgtggtcttgatcaacgaggggctcaacag
gctattgaatacgtcctgatcggaaaggcggtgctgggcgctgtaccaacccagactctc
atcgtcgcagaacggtttttcgatgagagcggtgggatgcaattggtaattcatgcgccg
tttggtggacgcatcaacaaggcgtggggattggctctgcgcaaacgattctgtgtgacg
ttcgacttcgagttgcaggccgcggccacggataatggcctggttatctccctcggcgag
aaacacagttttccactcgagtcggtgttcggctatcttcactccaaatcggtcagagag
gtgttggtgcaggctgtgctcttggcgcccatgttcaccacacgttggcgctggaatgcc
tcgcgatcattggcgctgctgcgattttccaacggcaagaaggtgccgccgcaaatccaa
cggatgaaatcggaggatctcttggcggcgattttcccggatgccatcgcctgccaggaa
aatctgacaggggagcgggtcgcgcgagagatcccggaccatcccttggtcaaggaaacg
ctccgagattgcttgactgaggcgatggatattgaaggactcacagcggtattgcaaagg
atcgaaagagggcaaatccgctctgttgcggtcgagacaccggctccgtccgtattttct
cacgaaatcctgaacgcgaatccctatgcctttcttgatgatgcaccgttggaagagcgc
cgggcgcgcgcggtggaaatgcggcgaacgttaccacccgacttggtcggggaagttggg
gcacttgatctcgaagcaatcgacgaagtcgtgcgtgagtcctggccaattgtgcgtgat
gcggacgagctgcatgacgcgttgctcacgctggtctgggtgccttccgagacggtgatc
gaatggcaatcgttcctaccggagctgatcgaatcagaccgtgccatggaactttcagca
aagggatgggtggcgacagaacatcgagagggagtagagcgagtgctggcgggagaagat
gatgcgacgcttaccggcattctccaagggtggatggagagtatcggtcccacgacagta
gcagagctcgccacgcgtctgcatctgccggtcgagccgatccggtcggcgatggttcga
cttgaagcctccggccaagttctccgtggccggtttacgcgttacgcttcacgcttcacg
agtgacgacatggaatggtgtcatcgccggttgctcgcacgcattcatcgactcacgatt
ggaaggctacgcagagagatcgagccggtcacggtcgttgagttcatgcggtttgtgatg
caatggcagcatgtgttgccgggatcacgtcagcatggtgaatccgggctcttacaggtc
attcagcaattggcaggattcgaggcggctgcatcctcgtgggaaccacagctcttgaga
ctgcgtatggccaagtatgaaccggaactcttggaccgtctctgtctgagtggcgcggtc
agttgggggcgtctctcatctcacccgaagatttcccaaggaggggatcaggatcggcgc
cgcatcatcgccacgagcgttgcccctatcaatctttttccacgcgacgacagtgagtgg
ttgttgcatgtatttcgcgatgactcagccgtgagcggtgctggttctcacactcacttg
agcgcggtggctcaggatgtacgacgtgcgctgggagagcgtggcgccagcttctttgcc
gatcttgcgagggagaccaaccatctgcccgcagaagtggaaggcgcactgtgggagctt
gtcgcagcagggattgtgacagccgatggatttgacaatctccgtgcgctcatggacccc
catcgacgccgagccgaggggcgtgaacgagcgcgtcggccacggtactcagccggtcgg
tggtcattgcttcgacagtctcactcagctctcagccttcagccctgcgaacttacagag
aaggtggctcgtcaactcttacgtcgctatggcatcgtgttccgtgatctcctccagcgg
gaatcgttggttccgtcgtggcgtgatctgctggtggtgtaccgcaggctcgagttgcaa
ggtgaggtgcggggcggacgatttgtgaccgggttcaccggcgaacagttttccctaccc
gaggccgtggaagcattgcgaacgatacgaaaaaacagtccatccttaggaacggagcac
gagatcaaactctcagcagcggaccctttgaacctcgtcggagtgattcttcctggctca
cgtgtgccggcggtaccgaccaattttcttgtattcaaagatggagcacttattcgtacg
gtgatcgggcggcagcatgacgctgcgctgtccattgacgcacagaccggcccggcaaca
gcccggctacctgcttga

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