Candidatus Nitrospira kreftii: Nkreftii_001938
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Entry
Nkreftii_001938 CDS
T08052
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nkf
Candidatus Nitrospira kreftii
Pathway
nkf03030
DNA replication
nkf03430
Mismatch repair
nkf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nkf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Nkreftii_001938
03430 Mismatch repair
Nkreftii_001938
03440 Homologous recombination
Nkreftii_001938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nkf03032
]
Nkreftii_001938
03400 DNA repair and recombination proteins [BR:
nkf03400
]
Nkreftii_001938
Enzymes [BR:
nkf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Nkreftii_001938
DNA replication proteins [BR:
nkf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Nkreftii_001938
DNA repair and recombination proteins [BR:
nkf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Nkreftii_001938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QPD04164
UniProt:
A0A7S8FE82
LinkDB
All DBs
Position
1878189..1881653
Genome browser
AA seq
1154 aa
AA seq
DB search
MASSFVHLHLHTQFSLLDGANQIEPLVRQIKSFNQPAVAMTDHGNMFGAVEFYRKAKDVG
VKPIIGCEAYMALGSRHAKKDSGLAHNDYYHLILLARNLTGYQNLIKLVSKGYLEGFYYK
PRIDKELLKLHHDGIIALSGCLSGEIPYLIGQKDMDAAMTVAGEFQEIFGKDHFYLEVQA
NGLDHQRVANAGILEIHKKLGIPMAGTNDCHYLKKDDARPHELMLCLQTGKTLSDPNRMK
FDTDQLYVKSTEEIAPAFAEFPDAVMNTCRIADYCELDLPLNKTHLPQYRVPEGFTDRES
YLEHLAVAGLKERLKERPSRVASAVYEQRLREELMVICSMGFAGYFLIVWDIIRFARSRA
IPVGPGRGSAAGSLVAYALRITDLDPLVYTLLFERFLNPERVSLPDIDMDFCMDRRGEVI
NYVVDKYGTDHVAQIITFGTLGAKAAIRDVGRVLELSYADADKVAKLVPNQLNITLQQAL
ETEPRLRELVETDPKIKELMANAQSLEGLARHASTHAAGVVISEGPLTDHVPLYKGANDE
IVTQYSMGDVEKIGLVKFDFLGLKTLTMIRRAETLINETHPEAPPLVIDQIPFDDPAAFA
LLSSGKTTGLFQLESSGMRDLLTGLKPDRFEDIIAIIALYRPGPMDLIPDFIKRKQGKVP
ITYEAPELEPILKDTYGVIVYQEQVMAIANKVAGFSLGQADILRRAMGKKKPEEMEKLRV
KFLEGATQKNIPEKKAEKLYELIQKFAGYGFNKSHAAAYAVVCYQTAYLKAHYPTEFMAA
LMTTDMGNQDKLVGYFTECRDLGIKVLGPDVNASRKQFAVDDGAIRFGLAAIKNVGEGAV
ESVLEVRSQTGPFASFFDFCRRVDLHKVNKRMLEGLIKAGAFDATCAKRSQLMAVLDQAV
EEGAASQRERDLGQISIFGEEPNGHSASVTLPTPVLPSVPEWDQAQRLKYERELTGFYIS
AHPLTRYEATLGALSTTFSIGLKDCADGGEVKLCGIIAAVKSMLTKKGDRMAYLTVEDLQ
GTAEVIVFPDLFKTAGDLIAPERLVRITGTIDRGDKGTKIRGSKIEPLAEVQAQSIKRIR
IRLTDRPEVREQLPRLLEVLRRHPGSTTISMSIRTEGPLEAETAPLQHLTVCPSDHFVSD
VEEVLGKGTLSLLS
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
gtggcgtcctcttttgttcatcttcatctccatacccagttcagtcttctcgacggcgca
aatcagatcgagccgctcgtccgccagatcaagtcctttaaccagcctgccgtggcgatg
acggaccatggcaacatgttcggtgcggttgagttttaccgcaaagcgaaggacgtggga
gtcaagccgatcatcgggtgcgaggcgtacatggccctcggaagtcgacatgcaaagaag
gacagtgggcttgcgcacaacgattactaccatctcatcttgctcgcgcgaaacctgacc
ggttatcagaaccttattaagctggttagtaaaggatatcttgaggggttctattataaa
cctcggattgataaggaactcttaaagcttcaccacgatgggattattgctttgtccggt
tgcttaagtggtgaaattccttacctcatcggccagaaagatatggatgctgcaatgacg
gtggctggcgagttccaggagatcttcgggaaagatcatttctatcttgaggttcaggct
aacggactcgatcatcagcgcgtagcgaacgccggaatcctggaaatccacaagaagctc
gggattccgatggcaggcactaacgattgccactatctaaaaaaagatgatgcgcgtccg
catgagttgatgctgtgtttgcaaactggaaagaccttgagcgatcccaaccggatgaag
ttcgacacagatcagctgtatgtcaaatctacagaagaaatcgccccggcgtttgcagag
tttcccgatgccgtgatgaacacctgccgtattgccgactactgcgaactcgatctcccc
ttgaacaagactcatctcccacagtatcgagtcccagaaggtttcacagaccgtgaatcc
tatcttgagcatctcgccgtcgccggtcttaaggagcggttgaaagaacgcccgagccgt
gtcgcctcggctgtttacgagcagcgcctgagggaagagctcatggtgatttgttcgatg
gggttcgccggatacttcctcatcgtatgggacattatccgttttgcgcgatctcgagcg
atccctgtgggacctgggcgtgggtccgctgccgggagtcttgttgcgtatgctctcaga
attacagacctggacccattagtttacacgctcttattcgagcgattcttgaatcctgag
cgtgtctctttgccggatatcgacatggatttctgcatggatcgtcgtggtgaagttatc
aactatgtcgtggacaagtacgggaccgatcatgtggcccagatcattacgttcggaaca
ctcggcgccaaagcagccatccgtgacgtgggtcgcgtgttggaattgtcgtacgccgat
gcggacaaggtcgcaaagctcgttcccaatcaattgaatatcacgctgcagcaggcactg
gaaacagagccacgcttgcgtgagttggtggagaccgatcccaagatcaaagagctcatg
gcgaacgcgcaatcgcttgaaggtctggcccgccatgcttccacccatgctgccggcgtc
gtgatttccgaaggaccactcaccgaccatgtcccgctctacaaaggtgcgaatgacgaa
atcgtgacccagtattcgatgggcgacgtcgagaaaatcggcttggtaaaattcgatttc
ttgggcctcaaaactctgacgatgattcggcgcgctgaaactctgatcaacgagacgcat
cccgaagcgccgccgctcgtgatcgatcagattcccttcgatgacccagctgcctttgca
ctgttgagctcaggaaaaacgactggattgtttcagctggaaagttcgggtatgcgagat
ctgctgacggggctgaaacccgaccggttcgaagatatcattgccatcatcgcgctctat
cgaccaggcccgatggatctgattccagatttcatcaaacgcaaacaaggcaaagtgccg
atcacctatgaggcgccagaattggagcctatccttaaagacacgtatggcgtgattgtc
tatcaagagcaagtgatggcgattgccaataaagtggccggcttctcgctggggcaagcc
gacatcctccggcgcgcgatgggaaaaaagaaaccagaggagatggaaaagctgcgtgtg
aagtttctcgaaggagcgacgcaaaagaacattcccgagaagaaagcagagaagctctac
gagttgatccagaagttcgccggatacggcttcaataaatcgcacgcggccgcctatgcg
gttgtctgctaccaaacagcatacctcaaggcacactatccgacagaattcatggcggcg
ctcatgacgaccgatatgggcaatcaggataaactggtcggctatttcaccgaatgtcgg
gatctgggaatcaaagtgttaggaccggacgtgaatgccagccgaaagcaattcgccgtc
gacgacggggccatccggttcggtttggcggcgatcaagaatgtcggtgaaggagctgtt
gagtcggtcctggaagtgcgatcgcagaccggccccttcgcatcgttctttgatttttgc
cggcgggtcgacttgcataaagtcaataagcggatgttggaaggattgatcaaagccggc
gccttcgatgctacctgcgccaagcgatcgcaactcatggccgtgcttgatcaagccgtc
gaagaaggtgcagcttcacagcgagaacgcgatctcggacaaatcagtatctttggcgag
gaacccaatggacacagcgcctcggtgaccctgcccactcctgtcttaccttctgtgcca
gaatgggaccaggcccaacgactcaagtacgagcgtgaattgaccgggttttatatttcc
gcccatcctcttacgcgctacgaagcaacactcggtgccctgtccaccacattctcgatc
ggcctgaaggattgcgccgacggtggtgaagtgaagctctgcggcattattgctgccgtc
aaatcgatgctcactaagaagggcgatcgtatggcctacctgacggtggaagacttgcag
ggcaccgctgaggtgatcgtcttccccgatctattcaagacagcgggagacttgatcgca
ccggaacggcttgtcagaattacgggcacaatcgatcgtggcgataaaggcacaaaaatc
cgcggtagcaagattgagccattggctgaggtccaagctcagtcgatcaaacgtattcgt
atccgcctcactgatcgtcctgaagtaagggaacaactgcctcgcttgctcgaggttctc
cggcggcatcccggcagcacaacgatttccatgtcgattcgaaccgaggggcccttagaa
gcagagacggctccactccagcatctcacagtctgtccaagcgaccactttgtatcggat
gttgaagaagtgctaggcaaagggaccctttctttgctatcttag
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