Candidatus Nitrospira kreftii: Nkreftii_003274
Help
Entry
Nkreftii_003274 CDS
T08052
Name
(GenBank) putative Penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
nkf
Candidatus Nitrospira kreftii
Pathway
nkf00550
Peptidoglycan biosynthesis
nkf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nkf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Nkreftii_003274
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nkf01003
]
Nkreftii_003274
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nkf01011
]
Nkreftii_003274
Enzymes [BR:
nkf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Nkreftii_003274
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Nkreftii_003274
Glycosyltransferases [BR:
nkf01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Nkreftii_003274
Peptidoglycan biosynthesis and degradation proteins [BR:
nkf01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Nkreftii_003274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
Motif
Other DBs
NCBI-ProteinID:
QPD05500
UniProt:
A0A7S8FGN4
LinkDB
All DBs
Position
complement(3201795..3204107)
Genome browser
AA seq
770 aa
AA seq
DB search
MSAHLSSQPVFSARRLVMLFLIVCGVALALLAGYGFVLSTSLALPKSDEHPPLLIYGAPF
FLTPGLHPVDEGLFDRLHRLEYRPATAKPKVAGEYFATKNSIEIFLHAQEEHRLPARLIK
LALTDDIVTEVLSGTDGRPVSLVALEPVVISGVRAGTKQLREWIPLDHVPPVLIQALLAI
EDRRFFSHFGVDPIAIGRALWTNITRGAVVQGGSTLTQQLAKNLFYSPKRTIWRKFKELV
ASLALEFKYRKQDILESYVNEIYLGQAGPVSIYGVGEAAHRYFGRPLDRLSIEEIALIVG
LIKGPNIYSPVKNIELSTKRRDVVLHRLRAEGVVTEESLKVALARPVKVMLTDDALTDAP
YFVDFLLKEIEQGIGVVTPEGSRIYSTLDSRSQQIAAQVLHEGLVKLEKNYPALADAEPP
VQGAVVVLDVKHGHVLAMVGGRDYRVSQFNRAVQAHRSAGSLFKPFVYLAGFEAARDLGA
AGLTPATLLADEPVTLESGTGQWSPQNYDRQYRGQVTVRTALEQSLNVPVVRTAHRTGMP
ALTRQLQAFGITTPLANNLSLALGSSTVSLLEITAAYAGLANGGVVIRPVALSNMTREGG
ETIWSPPLDRSQAATPQGAFLVTSLLKGVVDRGTASKARALGVKGPVAGKTGTTDGSRDA
WFVGYSPDIAIGVWVGFDDERPLKLTGAQAALPIWSELAVRLIPKDLPDFEVPRGVVQRR
IDPRTGQLATSRCPENKSEYFITGTEPKTYCEVHGGGLWERLKQTFDFSS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcccatctatcttctcagcccgtcttctcagcgcggcgcctggtgatgctgttc
ctcatcgtctgtggagttgcactcgcgctcctagcaggatacggatttgtcctctctacg
agtttggccctgccgaagagcgacgagcatccaccgttgctgatctacggagcaccgttt
tttctcacgccggggcttcatcccgtagatgaaggtttgttcgaccgtctgcatcgtttg
gagtatcgaccggccaccgccaagccgaaggttgcgggtgagtattttgcgacgaaaaac
tcgattgagatttttttgcatgcgcaagaagagcatcggcttcctgctcggttaatcaaa
ctggctttgacggacgatattgtaaccgaggtcttatccggcactgatggacgaccagtc
tcactcgtggcgctcgaaccggtcgtgatcagtggcgtacgggccgggacgaagcagctt
cgggaatggattccactggatcatgtccctcccgtcttgattcaggcgctcctggccatc
gaagatcgacgctttttttctcattttggagttgacccgatcgctatcggacgagcgctg
tggaccaatatcactcggggggcagttgtacagggtggcagtacactgacccagcaattg
gcaaaaaatctcttctactctcccaaacgcacgatatggcggaaatttaaggagctggtg
gcttcgctggcgctcgagttcaagtatcgcaaacaagatattttggaaagctatgtcaac
gagatctatctgggccaagccggtcctgtgtcgatctacggtgtgggggaggcggcccac
cggtacttcggcagaccactcgaccgattgtcgatcgaggaaattgcgctgatcgttgga
ttgatcaaaggtcccaatatctattcaccggtgaaaaacattgagctgtcaaccaagcgt
cgagatgtggtcctccaccgtttgcgagcagaaggggtcgtaacagaggaatcattgaaa
gtagccttggctcgtccggtgaaggtgatgttgaccgatgacgcccttaccgatgccccg
tactttgtcgatttcctgctcaaagaaatcgaacaagggattggagtggtcacccccgaa
gggtcacgaatctattcgacgctcgattccagatcgcagcagattgccgcgcaggtctta
catgaaggactcgtaaagctcgagaaaaactatcccgcattggccgacgccgagccgccg
gttcaaggagctgtcgtcgtattggatgtgaagcatgggcatgtgctggcgatggttggc
ggacgcgattatcgagtgagccagttcaatcgtgcggtgcaggcgcatcgatcagcgggc
tctctttttaaaccgtttgtgtatttggccggatttgaggcggctcgagacctaggggcg
gctggtctcacgccggcgacattgctggcagatgaaccggtgaccttggaatcaggtacg
ggtcagtggtcgccacaaaattatgaccgacagtatcgagggcaggtaacggttcgaacg
gcgctcgagcagtcattgaatgttccggtcgtccgaacagcccaccgaactgggatgccg
gcgctcactcgccagctccaagcctttggaattaccacccccctggccaataacctctcc
ctagcgctcggcagttctacggtctcgttactggagatcacagctgcgtatgccgggctt
gctaatggaggggtcgtgatccgtcccgtggcgctgtccaacatgacgcgtgaagggggg
gagacaatctggagtccacccctggatcgaagtcaggcggctactccacagggggcgttc
cttgtgacatctctcctaaaaggggtggtggatcgaggaactgcttccaaggccagagcc
ttaggcgtgaaggggccggtcgcaggcaagaccgggacgacggatggatcccgagatgcc
tggtttgtcggatactcgccggatatcgctattggtgtgtgggtcgggtttgatgatgag
cgacctctcaaactgaccggtgcgcaggccgccttgcccatttggagcgagctggccgtt
cggctcattccgaaggaccttcccgattttgaggtgccccgtggggtcgttcagcgccgg
attgatccaagaacaggtcagcttgcgacctcacgatgcccggagaacaagtctgagtac
tttattacagggacagagcccaagacctactgcgaggtccatggaggtgggctgtgggaa
cgattgaagcagacgtttgacttttcctcctag
DBGET
integrated database retrieval system
