Candidatus Nitrospira kreftii: Nkreftii_003637
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Entry
Nkreftii_003637 CDS
T08052
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nkf
Candidatus Nitrospira kreftii
Brite
KEGG Orthology (KO) [BR:
nkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nkf03032
]
Nkreftii_003637
03400 DNA repair and recombination proteins [BR:
nkf03400
]
Nkreftii_003637
Enzymes [BR:
nkf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Nkreftii_003637
DNA replication proteins [BR:
nkf03032
]
Prokaryotic type
DNA Topoisomerases
Nkreftii_003637
DNA repair and recombination proteins [BR:
nkf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Nkreftii_003637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
QPD05863
UniProt:
A0A7S8FHB0
LinkDB
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Position
complement(3577605..3579944)
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AA seq
779 aa
AA seq
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MGKSLIIVESPTKARTITKYLGRGYTVMASVGHIKDLPTSKLGVDLENDFEPQYVTIKGK
SKVLAEIKKKAEGADKIFLAPDPDREGEAIAWHLEQELLGKSKKKKKDGKIFRVLFNEIT
ESAIKRALQSPGEIDMKLVNAQQARRILDRIVGYQGSQLLWNKVRRGLSMGRVQSVAMRL
ICEREAEREAFRAEEYWSITALLAGANPPSFEAKLHSINGEDASIENGEQAGRVVADIQG
KTFVVQSIERREKKRNPVAPFITSRLQQEAARKLHFSPKKTMTLAQQLYEGIEIGAEGAT
GLITYMRTDSPRISNEAMTDAREVIQSRFGANYLPGTPNVYKTSKAAQEAHEAIRPTSAA
RDPESIRQYLDHDQYNLYKLIWNRFIASQMVPAILDVTRIDSAPVGTKERYIFRSTGTVV
KFPGHTIVYLEGVDKELPSQKPKADQEADDDERQLPTLAEGESLRLIEQEGQTVPGMLSK
QHFTQPPPRYNEALLIKELEEKGIGRPSTYAAIISTIQDRKYVEKTEGRLVPTETGKTVN
DFLLKGFPELINVDFTSQLEEQLDEVEEGNKQWVTAVRDFYTPFTREMERAKTIPGPKDI
VEPPTNIPCEKCGRMLEIKWGRNGKFLACPAYKDDPPCKNTQNFEKLPDGTIKIVPKEEI
TTDQVCDKCGSPMVVKTGRFGKFIACSAYPQCKTTKPLALGVKCPQPDCGGDLVQKRTKK
GRSFFACSNYPKCEYALWDRPVPKACPTCQAPFLVEKVSKQDGRSVQCRNEECGYREAG
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatcgttaatcatcgttgagtcgccgacgaaggcgagaactatcaccaagtat
ctgggccgtggctatacggtgatggcgtcggtgggccatatcaaagatttaccgacgagc
aagttaggcgtcgatctcgaaaacgatttcgaaccgcagtacgtcacgatcaaaggcaag
tcgaaggtgttggctgagattaagaagaaggcagaaggggcggacaagatattcctggcg
cccgaccctgatcgtgaaggcgaagcaattgcctggcatcttgagcaagagctgctcgga
aaatcaaaaaagaaaaagaaagacggcaagatctttcgggttttgttcaacgagatcacc
gagtctgctatcaagcgggcattgcagtcgcccggtgagatcgacatgaagttggtcaat
gcccagcaggctcgccgaatcttggaccgcatcgtcggctatcaagggagccagttgctc
tggaacaaggttcgtcgaggactcagcatggggcgtgtgcaatcagttgccatgcggtta
atttgcgaacgagaagcagaacgcgaggcattccgggctgaagagtactggtcgattacc
gcgctgctcgccggggccaatccgccgtcgttcgaagccaagctccacagtatcaacggc
gaggatgcgtcgattgagaacggcgagcaggcgggtcgagtcgtcgctgatattcagggg
aagaccttcgtcgtccagtcgattgagcgccgcgagaaaaagcggaaccccgtcgctccg
ttcattaccagccgtctgcagcaggaagccgcacggaaactgcacttttcgccaaagaaa
accatgacgcttgcgcagcagctctacgaagggattgaaatcggcgccgaaggggcgact
ggtctgatcacctatatgagaaccgattcgcctcgtatttccaacgaggcgatgaccgat
gcgcgcgaggtgattcagtcgcgattcggagcgaactatctcccagggacaccgaatgtc
tacaagacgtcgaaggcggcgcaggaggcccatgaggcgattcggccaacttcggcggcg
cgtgaccccgaatcaattcgtcaatatttggatcatgatcaatacaatctctataagttg
atttggaatcgcttcattgcctcgcagatggtgccggccattttggacgtgacacggatc
gattcagctccggttggaacgaaggagcgctatatctttcgctcgacaggaaccgtcgtg
aagtttcctggccataccattgtgtatctggaaggcgttgataaagagttgccgtcgcag
aagcctaaggcggaccaggaggcggatgacgacgagcgtcagctgccgacattagctgag
ggcgaatcgttacggttgatcgagcaggaggggcaaacggttcccgggatgttgtccaaa
caacatttcacgcagcctccaccgcgatacaacgaagcgctcctgatcaaagagctggag
gaaaaaggtatcgggcggccttcgacctacgccgcgatcatctccacgatccaggatcgg
aagtatgtcgaaaagacagaagggcgattggttccgactgaaacggggaaaaccgtcaat
gatttcttgttgaaaggattccctgaactcatcaacgtggatttcacctcgcagctcgaa
gaacaactggacgaagtagaagagggaaacaagcagtgggtcacggcggtgcgtgacttc
tacacaccgttcaccagagaaatggaacgagcgaagaccattcctggtcccaaagatatt
gtcgaacccccgaccaacattccctgtgagaagtgcggccggatgttggagatcaagtgg
ggacgaaacggaaaattcctcgcctgccccgcatacaaagatgatcctccctgcaagaat
acgcagaacttcgagaagctgccggatgggacgatcaaaatcgtccccaaagaggaaatc
accaccgatcaagtttgtgataaatgcggtagtccgatggtggtgaaaaccggacgcttc
ggcaagtttatcgcctgttccgcctacccgcagtgtaagaccactaaaccgttggccctg
ggtgtgaagtgcccgcagcctgactgtgggggcgacctcgtccagaaacggaccaagaag
gggcgttcgttctttgcctgcagcaactatcccaagtgcgagtatgcgttgtgggatcgt
cccgttccgaaggcctgtcctacgtgccaggctccgttcctcgtcgagaaagtcagcaag
caagacggccggagcgtgcaatgccgcaatgaagagtgtggctaccgcgaagcagggtga
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