Candidatus Nitrospira kreftii: Nkreftii_003760
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Entry
Nkreftii_003760 CDS
T08052
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nkf
Candidatus Nitrospira kreftii
Brite
KEGG Orthology (KO) [BR:
nkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nkf03016
]
Nkreftii_003760
Enzymes [BR:
nkf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Nkreftii_003760
Transfer RNA biogenesis [BR:
nkf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Nkreftii_003760
Prokaryotic type
Nkreftii_003760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QPD05986
UniProt:
A0A7S8J177
LinkDB
All DBs
Position
3696515..3697558
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AA seq
347 aa
AA seq
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MNNLDPFLTGHIPGIGGQIRTVPEDFRVEERPLYLPCGEGEHLYVTVTKRGLSTPDLVRR
LSSSLGIKSQAIGVAGLKDARAVTTQMVSLQGVTPEQVAGLNIDDMVLSLQVLGRHRNRL
RTGHHSGNHFRLVIRNVAGHAADAVPVILQQLSTCGVPNYFGPQRQGKRGNNYEIGAALL
HDARRREKMNRAQRIWYLNAYQSFLFNRMLAQRIHQIDRIFIGDWAMKLENGACFQVEDA
DIEQPRADRFEISPTGILFGSRVSWADGEPGHIEEAVMAEAGTTKEALIAAAKACGFRGE
RRAFRVPLAELEWSLADDTLTLSFNLPPGAYATSVLRELMKSPPTHP
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
gtgaataacctagacccgttcctcacaggccacatcccaggaatcggcgggcaaatccgc
accgtgcctgaagattttcgcgtcgaagaacggccactctatctcccatgcggagaaggg
gaacatctatacgtcacggttaccaaacgtggtctttccacaccagacctcgtccggcgg
ctctcctcttcactggggatcaaatcacaggccatcggggtcgctgggctgaaagatgcc
agggccgtcacaacccagatggtgtctttgcaaggagtcacacccgaacaggtggccggc
ctcaacattgatgacatggtcctgagccttcaggtcctcggacgtcatcgtaatcggctt
cgaaccggccatcattccggcaatcatttccgattagttatccgcaatgttgccggtcat
gcagctgatgccgtgccggttattcttcagcaactgagcacctgcggggtgcccaactac
ttcggccctcagcggcaagggaagcgcggcaataactatgagatcggtgccgcactctta
cacgatgcacggcgacgtgaaaagatgaacagggcgcagcgcatttggtacctcaacgcc
tatcagtcgttcttgttcaatcggatgctggcccagcgaattcatcaaatcgaccgcatc
ttcatcggcgactgggccatgaaattggagaacggcgcctgtttccaggttgaagatgct
gatatcgagcagccacgcgccgatcgatttgaaattagtccaaccggtattctctttggc
tcgcgcgtatcctgggcggatggggaaccaggacacatcgaagaagctgtcatggccgaa
gccggtacaacaaaagaagccctcatcgccgccgcaaaggcctgcggatttcgcggtgag
cggcgagcgtttcgtgttcctctggcagaactggaatggtcattggctgatgacaccctt
accctctcctttaatctacccccaggagcctacgccaccagtgtgcttcgagagctgatg
aaatctccgcctacacatccgtag
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