Candidatus Nitrospira kreftii: Nkreftii_003892
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Entry
Nkreftii_003892 CDS
T08052
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nkf
Candidatus Nitrospira kreftii
Brite
KEGG Orthology (KO) [BR:
nkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nkf03016
]
Nkreftii_003892
Enzymes [BR:
nkf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Nkreftii_003892
Transfer RNA biogenesis [BR:
nkf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Nkreftii_003892
Prokaryotic type
Nkreftii_003892
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QPD06118
UniProt:
A0A7S8FHT9
LinkDB
All DBs
Position
complement(3830150..3831079)
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AA seq
309 aa
AA seq
DB search
MEHQKHIEGVLIAHKEAGWTSHDVVAKVRKLLGACKVGHAGTLDPSATGVLPILVGRATR
IAEYLMDWDKEYRAVLRLGQTTDTQDASGQVLTKTEPCQVNEDMIRMVVTQFRGVQRQLP
PMYSAVKVSGQPLYKAARAGKTIDRVERSVTIHELEVLAVEGCDVTLRIVCSKGTYVRTL
CADIGQVLGVGGHLYALQRCRVGPLSIDKALTIDEIAGHLAMDSLQEQFLSLDQLLSQLP
TVVVDAEQAQRVVHGTPVSPVGISQLPASPHPIPVRLKNEAGQLLAIGTHNAQGSGPIKI
RKVFSLVTH
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaacaccagaaacatatagaaggcgttctcattgctcacaaagaagccggatggacg
tcacacgatgttgtggccaaggtacggaagttactgggcgcatgcaaagtcggtcatgcc
ggcacgctggaccctagcgccacgggtgtcctacctattctggtcggacgtgctacaaga
attgccgaatacctcatggattgggataaggagtaccgagctgttttgcggcttgggcaa
acgaccgacacgcaggatgcgtcgggccaggtgctgacaaagactgagccctgtcaggtg
aatgaggatatgattcgcatggtcgtcacgcagttccgaggagtacaacggcaattgcct
ccgatgtattcggccgtgaaagtcagcgggcaaccgctgtacaaagcagccagagccggc
aagaccatcgatagagttgagcggtccgttaccatccacgagctggaagtcctggctgtc
gaaggttgtgacgtgactcttcgtattgtgtgctcaaaaggaacatatgtgcgcacactg
tgtgccgacattggtcaagtcttgggcgttggtggccatctttatgcgcttcaacgttgt
cgagtcggccctctttcaatcgataaggcgttgacaatcgatgaaatcgcaggccatctc
gccatggactcgctccaagagcagtttctttcgttggaccaacttctgtctcagctcccg
acggtggtcgtcgacgcagagcaggctcaacgggttgtccatggaacgccggtgtccccg
gtgggaatcagccaactccctgcttcgccccatcccataccggtacggctgaagaatgag
gccggtcaactcttggcgattggcacgcacaatgcacagggttcggggccgattaaaatt
cgtaaagtattcagtcttgtgactcattaa
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