Candidatus Nitrospira kreftii: Nkreftii_004080
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Entry
Nkreftii_004080 CDS
T08052
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
nkf
Candidatus Nitrospira kreftii
Brite
KEGG Orthology (KO) [BR:
nkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nkf03400
]
Nkreftii_004080
Enzymes [BR:
nkf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Nkreftii_004080
DNA repair and recombination proteins [BR:
nkf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Nkreftii_004080
Prokaryotic type
Nkreftii_004080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QPD06306
LinkDB
All DBs
Position
4014686..4016131
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AA seq
481 aa
AA seq
DB search
MRGIVWFRRDLRLHDQPALTAACQECDEVVPLFVFDEPLLRSHEFGSACVNFMLGCLDEL
QASLAALGLTLQWRRGEPVEQIVQMATDWKADVVYWNRDYEPGAIERDRLAHQRLAKLGV
AVRTFKDHVVFEASEVRGATGEPLQRYSAYRARWWTKWHATTPAVQPIPTTLAKKKAAPL
PLSRPLPTAGELGYESIVLAFEPGEQNALKRLRWFMKGPLHSYAQGRNLPAIDGSSTLSP
HFRFGTLSPRVAIHAVLNSLTKGGPVSRTDVLTWVDELIWRDFFQQVLTGFPHVAKGPFK
AVPVPPSRAAGRERDQLFRAWCEGKTGYPIVDAGMRQLDHTGWMHNRVRMVVASFLIKDL
RIDWQSGERYFMQHLIDADVAANNGNWQWCASTGTDSMPGYRIFNPALQSKKFDPDGTYI
RRYIPELARVSAKRIHEPHLMTADEQERAGCRIGTDYPSPVVDHHLARQEYLNLGKQEAT
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgggatcgtttggtttaggcgcgatcttcgattgcatgaccagccggcactcaca
gctgcctgccaagaatgcgacgaggtcgttccgctgtttgtgttcgatgagccactgctg
cggtcgcatgagttcggatcagcttgcgtaaactttatgctgggatgcttggatgagctc
caagcatccctcgccgccctcggactcactctgcagtggcgacgcggtgagccagttgaa
caaattgttcaaatggcaaccgattggaaggccgacgtagtctattggaatcgcgactac
gaaccgggcgcgatagagagggaccgcctggctcaccagcgtttggcaaagctcggagtg
gcagtgcgaacgttcaaagatcatgttgtgtttgaagcgtctgaagtgcggggagcaacc
ggggaaccgttacaacgatacagcgcgtatcgcgcacgctggtggaccaaatggcatgca
acaaccccagcagttcaaccgatcccaaccacccttgcaaaaaagaaagccgcaccgctg
ccactctctcgtcctcttcccaccgccggtgagctagggtacgaatccatcgtcttggcg
tttgagcctggcgagcagaacgccctgaagcgattgcgctggttcatgaaaggaccgctt
cattcttatgcgcaaggtagaaacctgccggcgatcgatggcagctcaacactttccccg
cacttccggttcggcacactgtcgccgcgcgtggccattcacgcagtgttgaattcactg
accaaaggcgggccagtatcccggactgatgtcttgacctgggtcgatgagttgatctgg
cgtgacttcttccaacaagtcctcacggggttcccacatgtcgcgaaagggccatttaaa
gcggttcccgtaccaccatcacgagcggcggggcgtgagcgggatcaattgtttcgagcc
tggtgtgaaggaaagaccggctatccgatcgtggatgcaggcatgaggcaactcgaccac
acaggatggatgcataaccgtgttcgaatggtcgtcgcatcattcctgatcaaagatctt
cggatcgattggcagagcggcgaacggtatttcatgcagcacctgatcgatgctgatgtg
gcggcaaacaacggtaattggcagtggtgtgcgtcaaccggcaccgatagtatgcccggg
tatcggatctttaaccctgcgcttcagagtaaaaagttcgacccggacggaacctacatt
cgccggtatattcctgaactggcccgtgtatcggcgaagaggattcatgagccccatctc
atgaccgcagatgagcaagaacgggccggatgccgaatcgggaccgattatccgtcaccg
gttgtggaccatcacctcgcccgtcaggaatatctcaacctcgggaagcaggaggcaacg
agatga
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