Candidatus Nitrospira kreftii: Nkreftii_004128
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Entry
Nkreftii_004128 CDS
T08052
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nkf
Candidatus Nitrospira kreftii
Pathway
nkf03030
DNA replication
nkf03430
Mismatch repair
nkf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nkf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Nkreftii_004128
03430 Mismatch repair
Nkreftii_004128
03440 Homologous recombination
Nkreftii_004128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nkf03032
]
Nkreftii_004128
03400 DNA repair and recombination proteins [BR:
nkf03400
]
Nkreftii_004128
Enzymes [BR:
nkf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Nkreftii_004128
DNA replication proteins [BR:
nkf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Nkreftii_004128
DNA repair and recombination proteins [BR:
nkf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Nkreftii_004128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_22
AAA_5
RuvB_N
AAA_30
TIP49
AAA_18
AAA_16
ResIII
AAA_14
AAA_19
AAA_28
nSTAND3
AAA_assoc_2
TsaE
DUF6395
AAA_2
SKI
PIF1
Rad17
CbiA
RCF1-5-like_lid
Motif
Other DBs
NCBI-ProteinID:
QPD06354
UniProt:
A0A7S8FIC4
LinkDB
All DBs
Position
4072039..4073817
Genome browser
AA seq
592 aa
AA seq
DB search
MDYQVSARKYRPGTFDGVIGQPHVIQTLMNAVSTKRIAHAYLFSGTRGVGKTTVARILAK
ALNCERGPTSRPCDRCENCREIAQGSSVDVIEIDGASNTSVDDVREIRENVKFTPFRGQF
RVYIIDEVHMLSNSAFNALLKTLEEPPAHVVFVFATTEIHKIPATILSRCQHYNFRRIAR
TEIIERLRHVAAQDQLTLEDRSFVALARASEGSMRDALSLLDQAIAYGGKAIRHTDLEVL
LGAVPQELVQNLIRAVLTQDSPAALASLAHLLDQGHDLRAFCAEVVERLRNLLVAAVVSG
TTELRSLIETAEEDLNQLSREAKTLTPEQIQDLLAIFIQAEDSLRFSSHPRFVVETAAIR
ATRLICQRDSHTAQPVQDAPSPSNQKNVIDSEARKTIPPAVAPRTRQDAPVATKPASQPN
STSRPALPEPVPTPETDAATATSATMPTSPVDPHPTLHWESVQEEINASFPNMAPFLEAG
RFVGMDGGFVTIGFPKQATLARARLEKEENILVLARLCEQQMGHPVRVRIIELNEAHPPG
PTMAQIRATKEQEQRMVLFERAKSNPTVKQALEIFGVELADVRTIAQQEASE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggattaccaagtctctgctcggaaatatcgccccggcacatttgatggtgtgatcggt
cagccgcatgtcatccaaacgctgatgaacgcggtctcgacgaagcgaatcgcgcatgcg
tatctattttcaggcacacgaggcgtgggaaagacgaccgtcgcgcgaatcctcgcgaag
gcactcaactgtgaacgagggccaacgagtcgcccttgcgacaggtgcgagaattgccgc
gagatcgctcaaggaagctcggtcgacgtcattgaaattgacggcgcatccaataccagc
gtggacgatgtccgggagattcgcgagaacgtcaagttcacaccgtttcgtggtcagttt
cgtgtctatatcatcgacgaagttcacatgctctccaactcggcgtttaatgccctctta
aagacgcttgaagaaccaccggcgcatgtcgtcttcgtttttgcgaccacggaaattcac
aagatccccgcgacgattctttcgcgatgccagcattataattttcggcgcatcgccagg
accgaaatcattgagcggcttcggcatgtggctgctcaagatcagttgacactcgaggac
cgaagcttcgtcgcgctggccagggccagcgaaggaagcatgcgtgatgccctgagcttg
ctcgaccaggcaattgcctatggcggtaaggccatccgccacacggacctggaagtactt
ttgggagccgtacctcaagagctggtgcagaacctcattagagctgttttgacccaagat
agcccagccgctctggccagcctggcccatttgcttgatcaaggacatgatttgcgagca
ttttgcgcggaagtggtggaacggcttcgcaatttgcttgtagcagcagtcgtctctggc
acaaccgagttgcgcagtctaattgaaactgcggaagaggacctgaaccagctttcaaga
gaagccaaaacgttgacccctgaacaaatacaggacctattggcaatcttcattcaggca
gaagattcactccggttcagctcccaccctcgttttgtagtagaaaccgcggccatccga
gccacacgattgatatgccaacgagacagtcacacagcccagcctgtacaagacgcaccg
tctccttccaaccaaaagaatgtcattgactcagaagcgcgtaagacaattccaccagct
gtggctccccgtactcgacaggatgcgcctgtcgctacaaagccagcctctcaacctaat
tccacatccaggccggctcttccagagcctgtccctacacctgaaaccgatgcggcgaca
gcgacctcagcgaccatgccaacttcccctgttgacccacacccgaccttgcattgggaa
tcggtccaagaggagatcaatgcttcgtttcccaacatggcaccattcctcgaggctggt
cggtttgttggaatggatggaggcttcgtcacaatcggcttccccaagcaagcgaccctg
gccagagccagattggagaaggaagaaaatattctggtactcgcacggctatgtgaacag
caaatgggacatccagtccgtgttcgcatcatcgagctgaacgaggctcatcccccaggg
ccgaccatggcccaaattcgagccaccaaggaacaagagcagcgaatggtgttgttcgaa
cgtgcaaaatcgaatccaacggtgaagcaggcactcgagatcttcggcgttgagttggcc
gatgttcgtaccatagcccaacaggaggcaagcgaatga
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