Candidatus Nitrospira kreftii: Nkreftii_004153
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Entry
Nkreftii_004153 CDS
T08052
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nkf
Candidatus Nitrospira kreftii
Brite
KEGG Orthology (KO) [BR:
nkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nkf03009
]
Nkreftii_004153
Enzymes [BR:
nkf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Nkreftii_004153
Ribosome biogenesis [BR:
nkf03009
]
Prokaryotic type
ribosomal protein modification factors
Nkreftii_004153
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QPD06379
UniProt:
A0A7S8FI27
LinkDB
All DBs
Position
4093988..4095403
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AA seq
471 aa
AA seq
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MIGAVPQKTTIGFVNLGCSKNQVDSEIMLGALVTEGFQLTSDPQKAEVVIVNTCGFIEEA
KQESINTILEHGHLKKAGACRVLIAAGCLAQRYQGDLLKELPELDAVVGTGEFGKIAGIC
RDLLTPKKRHRRLWLSQPPYLYDELAPRVRLGTQHSAYVKIAEGCNRNCAFCAIPLMRGK
QRSRPVHSIVAEAQQLAREGVKEINLISQDTINYGVDLGLRQGLVQLLRELVKVAGLQWI
RPFYLYPQQVTDDLLDLYAGEEKITKYIDMPLQHINDRMLKRMHRLGDRTAIESLVERIR
ARIPQVTFRTAFIVGFPGETDAAFGELYKYVEQAQFDRVAVFLYSDEEGTSAVDLDEKVE
RDVMDERRNIILSMQESIAAAKGRAKIGSALDVLVDGRPEETESVLEGRHEGLAPEIDGV
VYIDEGSTDIATQSASDQTVLHPTAGSFCKIRITDAAGFDLVGRIVTKSVS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
ttgatcggagccgttccccagaaaactaccatcggctttgtgaatcttggctgttcaaag
aatcaagtggactcagaaattatgctgggcgcgctcgtcaccgagggctttcagctcacc
agtgatccccaaaaagccgaagtggtcatcgtcaatacttgcggcttcattgaagaagcg
aagcaagaatcgatcaacaccattctcgagcacggccatctgaagaaagcaggggcttgt
cgagttctgattgccgctggctgtttagctcaacgatatcaaggggacttgctgaaggaa
ttaccggagctagacgcagtggtcggcaccggagagttcggcaaaatcgcggggatctgc
cgcgacctcctcacccccaaaaaacgacatcgtcgcctttggctgagccaaccgccctat
ctttatgacgaattggcgcctcgcgtgagactgggaacgcaacacagcgcgtatgtgaag
attgcagaaggttgcaatcgcaactgcgccttctgtgcaattccactgatgcgaggcaag
cagcgcagccgaccggtgcactccatcgtcgcggaagcgcaacagctggcacgcgaaggg
gtaaaggagatcaatcttatctcccaggacacgatcaactacggagtcgatctggggctt
cgccaaggcctggttcagctactccgtgagctcgtaaaggtagcgggtctacagtggatc
cgccctttctacctctatcctcagcaagtcacggatgatttactggatctgtatgccgga
gaagaaaagattaccaagtacattgatatgcctcttcagcacattaatgatcgcatgctc
aagcgcatgcatcggctcggtgatcgcacggcaattgagtcactggtcgagcggatccgt
gcacgcatcccccaagtaaccttccggacagcgttcattgtcggatttcctggagaaacc
gatgcagccttcggcgagctgtataagtatgtggagcaggcgcaattcgatcgggtcgcg
gtgtttctctactccgatgaagaagggacctccgccgtcgacttagatgaaaaggtcgag
cgagacgtcatggatgagcgtcggaacatcatcctctcaatgcaggagtcgattgcagcc
gccaagggcagagccaaaatcggctctgccctcgacgtgctcgtcgacggccgacccgaa
gaaaccgagagtgttctagaagggcgccacgaggggctcgctccggagatcgatggtgtc
gtctacatcgatgaagggtcgactgacatcgcgacgcagtctgcgtcggaccaaactgtt
ctccatcccacggccggatccttctgcaagatcaggattaccgatgcagcgggtttcgac
ctcgtcggacgcatcgtcacgaaatctgtctcctga
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