Nitratireductor kimnyeongensis: KW403_16860
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Entry
KW403_16860 CDS
T07526
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nki
Nitratireductor kimnyeongensis
Brite
KEGG Orthology (KO) [BR:
nki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nki03032
]
KW403_16860 (topA)
03400 DNA repair and recombination proteins [BR:
nki03400
]
KW403_16860 (topA)
Enzymes [BR:
nki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KW403_16860 (topA)
DNA replication proteins [BR:
nki03032
]
Prokaryotic type
DNA Topoisomerases
KW403_16860 (topA)
DNA repair and recombination proteins [BR:
nki03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KW403_16860 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QZZ35394
LinkDB
All DBs
Position
complement(3554202..3556826)
Genome browser
AA seq
874 aa
AA seq
DB search
MDLVIVESPAKAKTINKYLGSNYKVLASFGHVRDLPPKDGSVRPDEDFAMSWSVDSPSSK
RLSDIAKAVKEADSLILATDPDREGEAISWHVLEVLKQKKVLKDKPVQRVVFNAITKKAV
LDALSHPREVDVPLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
EAEIERFIREDYWQIAATLATPRQESFEARLTTIDGKKLQKLDIKSQEQADDIKAMLDGA
SFKAVSVEAKPTRRNPAPPFTTSTLQQAASSRLSFGASRTMQVAQRLYEGIDIGGETAGL
ITYMRTDGVQMAPEALDQARKAIGAEFGERYLPEKPRFYSVKAKNAQEAHEAIRPTDFSR
TPDQVRRYLDADQARLYEMIWKRAIASQMQPAEIERTTVEIVAENEARNAGLRAVGSVIR
FEGFLAAYAIDKDENAEDEESRRLPEIHEGEEQTREKIEATKHTTEPPPRYSEASLIKKM
EELGIGRPSTYAATLKTLEDRDYVTIEKRKLMPQAKGRLVTAFLENFFERYVEYDFTADL
EEKLDKISDGQLSWKDVLRDFWNDFSGHVDEIKELRVTNVLDALNEELAPLAFPAKEDGS
DPRACPRCGTGQLSLKLGRHGAFVGCSNYPECGFTRQFGEAGNGENGENGLDGDKVLGKD
PHTEEEITLRSGRFGPYVQRGDGKEAKRAGLPKGWAPDSIDIEQALALLSLPRDVGQHPE
SGKMISAGIGRYGPFLLHDGAYANLETVEDVFSIGLNRAVTVIAEKQAKGGRGRSAPAAL
KELGDHPDEGGKITVRDGRYGPYVNHGKVNATLPKGKDPMDVTLEEALELIAAKAAKGGK
KKPAAKKKAPAKKATTTTKKTTAAKKKTAAKKEE
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgttatcgtcgagtcgccggccaaggcgaaaaccatcaacaaatatctgggc
tcgaactacaaggttctggcctcgttcggccatgtgcgcgaccttcctccaaaggatggc
tcggtgcgcccggatgaggatttcgccatgtcgtggagtgtggacagcccctcctccaag
cgattgagcgacattgcaaaggcggtgaaggaagccgacagtctgatcctcgccaccgac
cccgaccgcgagggtgaggcgatttcctggcatgtgctggaagttctgaagcagaaaaaa
gttctgaaagacaagccggtgcagcgcgttgtctttaacgccattaccaagaaggcggtg
cttgatgcgctctctcatccgcgtgaggtggatgttccgctggtcgatgcctatcttgcc
cgccgcgcgctcgactatctggttggcttcacgctctcgcctgtcttgtggcgcaaactg
ccgggcgctcgttccgcaggccgcgtccagtcggtggcactgcgcctggtgtgtgatcgc
gaggcggagatcgagcggtttatccgcgaggattactggcagatcgccgccacgctcgcc
accccgcgtcaggaaagcttcgaggcgcgactgaccacgatcgatggcaaaaagctccag
aagcttgacatcaagagccaggagcaggccgacgacatcaaggccatgctcgatggtgcc
tcattcaaggcggtctccgtggaggcaaagcccaccaggcgcaatcccgcaccgccgttt
acgacctctaccctgcagcaggcagcctcctcgcgtctcagtttcggggcgtcgcgcacc
atgcaagtggcgcagaggctttatgagggcatcgacattggcggcgagacggcgggtctc
atcacctatatgcgaaccgacggcgttcagatggcccccgaggcgctcgatcaggcccgc
aaggcgatcggcgcggaattcggcgagcgctatttgcctgaaaaaccgcgtttttattcg
gtgaaagccaagaatgcgcaggaagcgcatgaggcaatccgtccgacggatttctcccgc
acgcccgatcaggttcgccgctatctcgatgccgatcaggcccgtctctacgaaatgatc
tggaagcgggccatcgccagccagatgcagccagccgagatcgagcgcaccacggtcgag
atcgtggccgagaatgaggcccgcaatgcgggcctgcgcgccgtcgggtcggtgatccgg
ttcgagggtttccttgccgcctatgcgatcgacaaggacgaaaacgccgaggacgaggaa
agtcgccgcctgcctgaaatccacgagggcgaggagcaaacgcgcgaaaagatcgaggcc
accaaacacacgaccgagccaccgccgcgctactcggaagcctcgctcatcaagaagatg
gaagagctgggcatcggccgtccctccacctatgcagcgacgctcaaaacgcttgaggat
cgtgactatgtgacgatcgaaaagcgcaagctcatgccgcaggcaaagggccggctggtc
accgcatttctggagaatttcttcgagcgctatgtggaatatgatttcacggcggacctt
gaggaaaagctcgacaagatttccgacggacagctttcctggaaggacgtgctgcgcgac
ttctggaacgatttctccggtcatgtggacgagatcaaggagctgcgcgtcacgaacgtg
ctcgatgcgctgaacgaggagctcgctccgctcgctttccccgccaaggaagatggcagc
gatccgcgtgcatgtccgcgttgcggaaccggtcagctctccctgaagctcggtcgccac
ggtgcctttgtcggctgctccaactatcccgaatgcgggtttacccgccagttcggcgag
gccggcaatggcgagaatggcgaaaacggtctcgacggcgacaaggtgctcggcaaggac
ccgcacacagaagaagagatcacgctgcgctccggccgtttcggcccctatgtgcagcgc
ggtgacggcaaggaagccaagcgcgccggcctgccgaagggctgggcacctgattccatc
gacatcgaacaggcgctggcgctgctctccctgccgcgtgatgtgggccagcatcctgaa
tccggcaagatgatatccgccggcatagggcgctatggccccttccttctccatgacggc
gcctatgccaatctggaaaccgtcgaggatgtgttctccattgggctgaaccgcgctgtc
accgtgattgcggaaaaacaggccaaaggcgggcgcggacgctctgctcctgcagccttg
aaagagcttggcgatcatcccgacgaaggtggcaagatcaccgtacgcgacggtcgctat
ggtccttatgtcaaccatggcaaggtcaacgcgaccctccccaagggcaaggacccgatg
gatgtcacgctggaagaagcgctggaactgatcgctgccaaggcggccaagggcggcaag
aagaagcccgcggccaaaaagaaggctccggcgaagaaggcgaccaccaccaccaaaaaa
accaccgcggcgaagaagaagaccgcagccaagaaagaggaataa
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