Niastella koreensis: Niako_0202
Help
Entry
Niako_0202 CDS
T01679
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
nko
Niastella koreensis
Pathway
nko02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Niako_0202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nko03021
]
Niako_0202
Transcription machinery [BR:
nko03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Niako_0202
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
UPF0122
DUF5035
PhyR_sigma2
DUF1492
TRL
Motif
Other DBs
NCBI-ProteinID:
AEV96602
LinkDB
All DBs
Position
complement(247570..248214)
Genome browser
AA seq
214 aa
AA seq
DB search
MKKKILEKENWLTAFNQGSSSAFRIIFESYNKILFTCAMQLVKDKEQAEDIVSEAFTKLW
QRHDVFQTEEHIKAFLFVATRNASLNYLRHIQRKTASQSELSYLQRDKDDQDIITDMIEG
ELLRKIYPLIETLPSKCKTIFKLIYFEDASTDEVAEKLHITPRNVLNQKRRAIQLLKKKL
LVAVFVSLCMNGSMTCKPKAERIVENITDFIYMH
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaaaattttggaaaaggagaattggctcacagcattcaatcaagggagtagt
agcgcctttcggataatcttcgagagctacaacaaaatcctttttacctgcgccatgcaa
ttggtaaaggataaagagcaggctgaagatattgtttctgaagcctttactaaactctgg
cagcgccatgatgtgtttcagaccgaagaacacataaaagcattcctgtttgtagctacc
cgcaacgccagcctcaattacctgcggcatatacaaagaaaaacagcttcgcaaagcgaa
ttgtcgtatttacaaagagataaagacgaccaggatattattacagacatgattgaaggc
gagttattgcgaaagatctatccactgatagagaccctgcccagcaaatgcaaaaccatt
ttcaaactcatttattttgaagatgccagcaccgacgaggtagcggaaaaactacacatt
acaccccgaaatgtcttaaaccagaaaagacgggccattcaactgctaaaaaagaaatta
ctggtggcggtttttgtaagcctttgcatgaacgggtcaatgacctgtaaaccgaaagct
gagcgcattgtcgaaaacataacggattttatatatatgcactga
DBGET
integrated database retrieval system
