Niastella koreensis: Niako_0762
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Entry
Niako_0762 CDS
T01679
Name
(GenBank) FG-GAP repeat protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nko
Niastella koreensis
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Niako_0762
Enzymes [BR:
nko01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Niako_0762
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
DUF6250
RGI_lyase
FG-GAP
FG-GAP_3
Methyltransf_FA
Laminin_G_3
Motif
Other DBs
NCBI-ProteinID:
AEV97144
UniProt:
G8TBN4
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Position
931114..933720
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AA seq
868 aa
AA seq
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MFILTIKACYINMQKRHISLALTAVIIFIFWGSPGNAQRQMEALGRGVVAVHSSEKQVFI
SWRLSGTEPATTAFNIYRQTGEQTPVRLNRTPLTNVTWFIDSLANLSASTTWQVKPVLNG
KELTAGAGAFTLPANAPVQQYLSVPIQPPPGSSIMNQAYTFSANDASVGDLNGDGEYELI
LKWEPSNAKNPPQPGFTGPQIIDAYTLTGKLLWRIDLGKNIRSGAAYTQLLVYDLDGDGR
AEVVCKTADGTIDGKGRVIGDSTKDWRTFTEKDPTYGKIVNGPEYLTVFDGLTGAALATS
TFIPDRYPLNGWGGIGGNGGNDNNGGRADRYTAGIAYLDGVHPSVVFVRGWYGRSVLAAW
DYRNKQLTSRWVFDSKDAGNPYSGMGNHSLTVGDVDGDGKDEICIGAMTVDDDGKGLYTT
GLRHGDALHMTCMNPDRPGMEVFGIHESEEKTLALQTPGVAMFDAKDGKILFRLAPGVDV
GRGVAADIDPTHKGFENWGGPGGLRDVHGKTITERTPSSTNFVIWWDGDLTRELLDKNRI
DKWDWKNETTNNLLTAEDCVANNGTKATPCLSADLFGDWREEVIWRTADSKELRIYTTTI
PTTHRFYTLMHDPQYRLAIAWQNVSYNQPPHPGFYFGEGMTGQPRPDITTPRVQQQTDAS
SLTGGTLIYSDNFSKPVDPRQWIVEAAPEERASVHTQNDQLVLDTKGGVTVWLNQLLKNN
IRIEYDRKVVVAGGVNDRLSDLNNFWMAKDPGNKTLFTRNGVLESYDSLQLYYAGMGGNS
NRTTRFRKYEGNGERKLLQEFTDATHLLQPNKIYHIAIITKNGVTSYWVDGQCYFSYNDP
SPLKEGYFGFRSTKSHQEVSQFKVFQVD
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtttattttaaccatcaaggcttgctatataaatatgcaaaaacgacatatatccctc
gcgcttactgctgttatcatttttatcttttggggttcaccaggtaatgcacaacgtcaa
atggaagcccttggacggggggtagtagccgtacatagcagcgaaaagcaggtatttatc
agttggcggttatcaggtactgagccggcaaccactgcatttaatatctatcggcaaact
ggtgagcaaacaccggtgaggttaaatagaacaccgcttaccaatgttacctggtttatt
gattcgctggcaaacttatcagccagtaccacctggcaggtaaagcctgtattgaatgga
aaagaattaacagcaggcgccggagcgtttacattaccggccaatgcgccggtacaacaa
tatttatccgttccaatacaaccaccgcccggttcatctatcatgaaccaggcctatacg
ttcagcgccaatgatgccagtgtgggggatctgaatggcgatggggaatatgagctcatt
ttaaaatgggagccttccaatgcaaagaatccaccgcagcccggctttaccggtccgcag
atcatagatgcctatacccttacaggaaaattgttatggcggatagatctgggtaagaat
atccgttccggcgctgcctatacgcaactattggtatatgacctggatggggatggccgg
gctgaagtagtttgtaaaactgccgatggcactatagatggcaagggcagggtaattggt
gacagtacaaaagactggcgcacatttactgaaaaagatcccacctatggtaaaattgtg
aatggaccagagtacctgacggtatttgatggcctcacgggggcggcactggctaccagt
acgtttattccagaccggtatcctttgaacggttggggcggtattggcggaaatggcggc
aatgataacaatggcggccgcgccgaccgctatacggccggtattgcttacctggatggt
gtgcaccccagtgtggtgtttgtacgcggctggtatggccgctcggtactggcagcctgg
gactatcgtaataaacaattaaccagccgctgggtattcgattcaaaagatgccggcaat
ccctatagcggaatgggtaatcatagccttacggtaggcgatgtagatggagacgggaaa
gacgagatttgtattggcgccatgacggtggatgacgatggcaaaggtttatatactacc
ggactgcgccacggcgatgctttgcatatgacctgcatgaaccccgaccggccgggtatg
gaggtgtttggcattcatgaaagtgaagaaaaaacactggcattacaaacgcccggtgtg
gctatgttcgatgcaaaggatggtaagatcctgttccgtctggccccgggtgtggatgta
ggccggggtgtggcggccgacatcgatcccacgcacaaaggttttgagaattggggcggc
cccggtggcttgcgggatgtacatggaaaaacgatcacggagagaacaccctcttctacc
aactttgttatttggtgggatggagatctaacccgcgaattattagataagaaccggatt
gataaatgggactggaaaaatgaaacaaccaataacctgcttaccgcagaagattgtgtt
gccaataatggtaccaaggcaacgccttgtttaagcgccgacctgtttggtgattggcgg
gaagaagtgatctggcgaacagctgatagtaaggaattgcgcatttataccactacgatt
cccacaacccatcgtttttataccctgatgcatgatccgcaataccggttggctatagcc
tggcagaatgtaagctataaccagccaccgcatcccggtttttattttggggaaggtatg
accggtcagccaaggcctgatatcacaacgcccagggtgcagcagcaaacagatgccagt
tcgctgaccgggggaacacttatctattcagataatttttcaaaaccggtagatccccgt
caatggatcgttgaggcagccccggaggagcgagcttcggtgcatacacaaaacgatcaa
ttggtattagataccaaaggcggcgtaacagtttggttgaaccagttattaaagaataat
atccggattgaatacgatcgcaaagtagtagtggcaggcggggtgaacgaccgcctgagt
gaccttaataatttctggatggccaaagatccgggaaataaaaccttgtttacccgtaat
ggcgtactggaatcgtatgactcgctccaattgtattatgcgggcatgggtggtaacagc
aatcgcacaacccggttcagaaaatatgaaggcaatggagaaagaaaattattgcaggag
tttaccgatgcaacccatttattacagcccaataaaatatatcacattgctatcattact
aaaaacggtgttacttcctattgggtagatggccagtgttatttctcgtataacgatcct
tcgccattaaaggaaggttattttggtttccgaagtaccaaatcgcaccaggaagtaagt
cagtttaaagtgtttcaagtggattag
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