Niastella koreensis: Niako_1000
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Entry
Niako_1000 CDS
T01679
Name
(GenBank) protein translocase subunit secF
KO
K12257
SecD/SecF fusion protein
Organism
nko
Niastella koreensis
Pathway
nko02024
Quorum sensing
nko03060
Protein export
nko03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Niako_1000
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Niako_1000
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Niako_1000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nko02044
]
Niako_1000
Secretion system [BR:
nko02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Niako_1000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
ACR_tran
Sec_GG
MMPL
LiaF-TM
YolC_YozM
Motif
Other DBs
NCBI-ProteinID:
AEV97379
UniProt:
G8TGF6
LinkDB
All DBs
Position
complement(1227880..1230918)
Genome browser
AA seq
1012 aa
AA seq
DB search
MRALVSIFAGLLILISLYQLSFTWFVNQHEKEMGKKAEMYVKRTYPLTPQQKYPSNTEAR
AYYKDTVDNAHDAYLDSLLTATRDKKITWWGQTYQKAKESELLLGLDLQGGINVTMDIAL
DGLVKNLANNQKDPGLTNAIADAQRKKLNSDKNFIDLFADSYHEQNPGARLAPLFVNANN
KLSGDATDSKVLNYIHEQANAAMQQTYQVLRNRIDQFGVAQPNINLDENKGIITVELAGA
SDPDRVRKYLQSTAHLQFWEVYTLEELSNSVMTAAKSLDEYMAATITDSNGVAKKDTTAK
NLLVSKIKFIPPQQDPNTGKVSYSPSLGAALLADTAAVNKYLSLPVVRNNFPANIKFLWG
KQDRDDDGKLSNFLRLYAIKTIPGRDKAFLEGDAIEDARQEFDQVTNEVAVAMEMNPTGA
RNWATLTGRNVGHPIAIVLDDIVYSAPNVIQKIEGGHSRVTMGSGGKNQQLVITEANDLA
NILKAGKLETPAIIVQEQVVGPTLGTQAVHGGIMAFAISFIVIFALMLVYYNTAGIVANI
ALILNLLFTIGVLSALNATLTAPGIAGLVLTIGMAVDTNVIIFERIKEELSKGNTYAQAV
KAGYLRSLPPVLDAHITTMLTAIILFIYGLGPVLGFATTQILGILLSLFCGILVSRLITD
FYTNKNRHFVYFTGLSKRIFKHAAFKFIQYRKVAYGISAVVLLLGVASFFHGFRYGVEFS
GGRSYVVNFGKSVNAEEIRNSLEKTFGSTPTIKTYGGPDKLNITTDYRVSETGITVDSAV
QSTLYNGLKSYLPVGTTQQDFNTRLLIGSNKVNPTISDDLKKGAQWATFWSMLIIAIYIF
IRFRDWRYSLGTIVALLHDVLVTMAVFSFLKDVVPFPLEIDQHFIAAILTVIGFSMNDTV
IVYDRIREYSHTMHGADKTTIINKAINDTLSRTIMTSLTVFLTILILFLVGGEVTKGFAF
AMLIGVITGTYSSIFVAAPILIDFAKDKPLGEPAPAAKTGTTATKAAVTNKA
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgagagcactggttagcatttttgcaggtctgttgatactgatctctttataccagctt
tcctttacctggttcgtaaaccagcacgaaaaagaaatgggtaagaaagcggagatgtat
gtaaaacggacctatccccttactcctcaacagaagtacccctccaacactgaagcccgc
gcctattacaaggataccgtggacaacgcacatgacgcttatctcgatagcttgctgact
gctacaagagacaaaaaaattacctggtggggtcaaacttaccagaaagcgaaagaaagc
gaattgttgctgggtctcgatctgcaaggtggtatcaacgtaacgatggatattgccctg
gacggccttgttaaaaacctggctaataaccaaaaagacccaggattaacgaacgctatc
gccgatgcgcaaagaaaaaagcttaacagcgataaaaactttatcgacctgtttgctgat
tcttaccacgaacaaaacccgggcgccagactggctcccctgtttgtgaacgccaataac
aaactgagcggcgatgctactgacagcaaagtgttgaactacattcacgaacaggccaat
gccgccatgcaacagacctaccaggtgctgcgtaaccgtattgaccagtttggcgtggcg
caacccaacatcaacctcgatgaaaataaaggtatcatcaccgtggaactggccggcgcc
agcgatccagaccgtgttcgcaaatacctgcaatcaaccgctcacctgcaattctgggaa
gtatacacattggaagaattgtctaattctgtaatgacagcagctaaatcgctcgacgag
tacatggccgctactattacagattcaaatggtgttgctaaaaaagatactactgccaaa
aacctgctggttagtaaaatcaaattcattcctccgcaacaggaccccaataccggcaaa
gtaagctactccccttcactgggtgcagcccttttagccgatactgcagcggttaataaa
tacctgagcctgccggttgttcgcaacaatttccctgcaaacattaaattcctgtggggt
aaacaagaccgcgacgatgatggtaaactgagcaattttctccgtttgtatgcgatcaaa
accattcccggcagagacaaagcttttctggaaggcgacgctattgaagatgcccgccag
gagtttgaccaggttaccaatgaagtggccgttgccatggaaatgaaccccaccggcgcc
agaaactgggctacccttaccggaagaaatgtaggtcacccaattgctatcgtattggat
gacatcgtttacagcgcccctaacgtaattcaaaagatcgaaggcggccactcccgcgta
accatgggttctggcggtaaaaaccagcagctggttatcacggaagccaatgacctggcc
aacatcctgaaagcaggtaaactcgaaacacctgctatcatcgttcaggaacaggtggtt
ggtcctaccctgggtacacaagctgtacatggcggtattatggccttcgccatttcattt
atcgtgatcttcgccctgatgctggtatattataataccgccggtattgtagccaacatc
gccctgatactgaacctgttgtttaccatcggcgtactgagcgccctgaatgccacgtta
acagcacccggtattgccggtctggtgttgaccattggtatggcggtagacaccaacgta
atcatctttgaacgtattaaagaagagctgtcaaaaggtaatacctacgcacaggccgtt
aaagccggttacctgcgttcattaccaccggtactcgatgcccacatcactaccatgttg
accgctatcatcctgttcatttatggtttaggcccggtattaggttttgccactacccag
atcctcggtattttgttatcgttgttctgcggtatcctggtatcacgcctgatcactgat
ttctataccaacaagaacagacacttcgtatacttcaccggtttatcaaaacgcatcttc
aaacacgcggcgttcaagtttatccagtaccgcaaggttgcctacggcatttctgcagtg
gtattattactgggtgtagcttctttcttccacggtttcagatacggtgttgaattcagc
ggcggcagaagctatgtagtgaattttggtaagtctgtgaatgctgaagagatccggaat
tcgctggaaaaaaccttcggcagcacacctaccattaaaacatatggcggtcctgataaa
ctgaacatcactaccgattaccgcgttagcgaaaccggtataacagtggattcagctgta
caaagcactttatacaatgggttgaaatcttacttacctgtaggcactacccagcaggat
ttcaacacccgtttactgataggtagtaacaaggtgaaccccaccatctccgatgacctt
aagaaaggcgctcaatgggctactttctggtcaatgctgatcattgccatctatatcttc
atccgtttccgcgactggagatactctttaggtaccatcgtagccctgttgcacgacgta
ctggtaaccatggcagtgttctcgttcctgaaagatgtggtgcccttcccgcttgaaatt
gaccagcactttattgctgcgattctgacggtgattggtttctccatgaacgataccgtg
atcgtgtacgaccgtatccgcgaatacagtcataccatgcacggcgccgataaaacaacc
attattaacaaagcgatcaacgataccctgagccgtactattatgacgtcgctcaccgtg
ttcctcaccatcctcatcctgttcctggtaggtggtgaagtaaccaaaggtttcgccttc
gccatgttgatcggtgttattaccggtacttattcttctatctttgtagctgcgccgatc
ctcatcgactttgccaaagacaaaccgctgggtgaacccgctcctgctgccaaaacagga
acaaccgccaccaaagcggctgtgacgaataaagcataa
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