Niastella koreensis: Niako_1763
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Entry
Niako_1763 CDS
T01679
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nko
Niastella koreensis
Pathway
nko03420
Nucleotide excision repair
nko03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Niako_1763
03430 Mismatch repair
Niako_1763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nko03400
]
Niako_1763
Enzymes [BR:
nko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Niako_1763
DNA repair and recombination proteins [BR:
nko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Niako_1763
MMR (mismatch excision repair)
Other MMR factors
Niako_1763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_30
AAA_11
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
AEV98126
UniProt:
G8TAG4
LinkDB
All DBs
Position
2168973..2170922
Genome browser
AA seq
649 aa
AA seq
DB search
MFRPITNDDIAKIEELLLPAGQKFDQQRRDIIQCQHSIDVNACPGSGKTTVMLAKLLLLT
RQMPFKNNQGICVLTHTNVAINEIKGKLGLTEANIFNYPNHFGTIQSFVNKFLAIPGYMV
KFPGKRPAIIDKDWHDSVVAKRYNSWRGAGKGWVGRMREPIPALQSFKFNSNFDNILTGL
GENPVFKTKGSAYKDIYSYKMSILQDGILSFEDAYILAEYYLDQQPQIAKLIQKRFPLVI
IDEMQDTDSHQLSLLGKIFNPAKTVIQRIGDENQAIYNKVSSQVVWAIGQQSLPLTGSKR
FSTQIANQIDRVCVTPRNMAGNHQVANIQPNIILYTQANIQRVIPHFANLVIESGITTTD
RPCKAVGWVKEKEQQPGQTKNCIKSYWPDYSFINTASKTEYNNLNEYFTNPDEEIVTKQG
TSYFMDRIYLVLVKLLRMGDIKHPTGGYYSKTALERKIKLSPTINDQLRSGMISWIREIR
CGRDPSVDVREFITQQFFPLFGITANREFDSFLNNQNPSAKNNNLQQNTGNIINHSYDGA
VAAHTGKEIPIHVNTIHAVKGETHTATLYLETYYFDDDIKRIIAYLKIGRGPAISTKQQR
IIETLKMAYVAMSRPTHFLSVAIRSHGITANDIQQLETAGWRVDTVLNV
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggccaataactaacgacgatattgcaaaaattgaggaattattgctgccagcc
gggcaaaagtttgatcaacagcgcagagacattattcaatgtcagcattccattgatgtg
aatgcctgcccaggaagcggtaaaaccacggttatgttggcaaagttgctcttgctaacc
cgacaaatgccgtttaagaataaccagggaatttgtgtattaacgcataccaacgttgcc
attaatgagatcaagggaaaattgggtttaacggaagccaatatatttaactatccgaat
cattttggcaccatacagagttttgtaaataaattcttagctatacctggttatatggta
aagtttccagggaagcgaccggcaataatagacaaagattggcatgatagtgtggttgca
aaaagatataatagttggcggggggcaggcaagggttgggtaggtcgcatgagagaacct
atcccagcgctacaatcgtttaaatttaattccaactttgataatattctcaccggttta
ggtgagaatcccgtttttaaaaccaaaggttcggcttacaaggatatctattcgtataag
atgagcatactgcaggatggcattttaagttttgaagatgcatacatactggcagaatat
tatttggaccaacaaccgcagatagctaaactcattcaaaaaagatttccgctggtcatt
attgatgaaatgcaggataccgactcccatcagttatcactactaggtaaaatatttaac
ccggcgaagacggtcattcaacgaatcggtgatgaaaaccaggctatatataataaagta
tcaagccaggtggtatgggcaatcggtcagcaatcattaccattaacaggtagcaaacgc
ttttcaacgcaaatagctaaccagatagacagggtttgtgttacaccaaggaacatggca
ggaaatcatcaagtggcaaacattcaacccaatataattctatacacacaggcaaacatt
cagcgtgtgatcccacactttgcaaatttggtgatcgaatcaggcattactacaactgat
cgtccatgcaaagctgtgggatgggtaaaagaaaaagaacaacagcctgggcagacaaaa
aactgcattaaatcttattggccagattattcattcatcaatacagcgtcaaaaacagag
tacaataacctaaacgaatatttcacaaaccctgatgaagaaatcgtaacaaaacaggga
acgtcctattttatggacaggatttacttggtgttagtaaagttactgcgaatgggcgac
atcaaacatcccacaggtggttactattcgaaaaccgcgctggaacgaaaaattaaattg
agccctaccatcaatgatcaacttcgctctggaatgatctcctggatccgggaaatcagg
tgtggccgcgacccatctgttgacgtgcgggaattcattacacagcaatttttccctttg
tttgggataacagccaaccgggagtttgacagttttttaaacaatcaaaatccatcagca
aaaaacaataacctacagcaaaataccggaaatattattaatcatagttacgatggagca
gtagccgcacacactggcaaagaaatcccgatacatgtcaatacaatccacgcggtaaaa
ggcgaaacgcatactgctacactttaccttgagacctactatttcgatgatgacataaaa
aggataatagcgtatcttaagattggccggggaccggccatatccacaaagcagcaaaga
attatagaaacattaaaaatggcgtatgtagctatgtcgcgccccacgcattttctgagc
gttgctataagaagtcatggtattactgcaaatgatattcaacagcttgagactgctggc
tggagggttgatacggttctcaacgtttag
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