Niastella koreensis: Niako_2008
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Entry
Niako_2008 CDS
T01679
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nko
Niastella koreensis
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nko03016
]
Niako_2008
Enzymes [BR:
nko01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Niako_2008
Transfer RNA biogenesis [BR:
nko03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Niako_2008
Prokaryotic type
Niako_2008
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AEV98363
UniProt:
G8TEF3
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All DBs
Position
2443247..2443933
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AA seq
228 aa
AA seq
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MQEAPNIFEAGQVLLINKPLEWTSFDVVRKIRNAIKIKKVGHAGTLDPLATGMLILCTGK
FTKRINEYMAQEKEYTGTITLGAITPTYDLESEPRDFKDYSSITPEQLQTIAAQFTGEIM
QVPPMHSAIKKDGKRVYELARAGKTIELEPRRITIKEFEFTKIELPVLYFRVVCSTGTYI
RSLANDVGKAAGCGAYLSSLCRTRIGEFSLDKSMTMEEAMAWIEGMKR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaggcacctaatattttcgaagcaggacaggttttattgatcaataaaccactt
gagtggacatcctttgacgtagttagaaagatccgcaatgcgatcaaaataaaaaaagta
ggtcatgccggtacgctcgatccgttggctaccggcatgcttattttgtgtacgggcaag
tttaccaagcgcataaatgagtacatggcgcaggaaaaggagtacaccggcaccattacg
ctgggcgccattacgcctacctacgacctggagagcgagccccgggattttaaagactat
agttccattaccccggaacaattacaaaccattgccgcgcagttcaccggcgaaattatg
caggtaccgcccatgcattcggccattaaaaaagatggtaaacgggtgtatgagctggcc
cgggccggcaaaaccattgagctggagccccgccgaattaccataaaggaatttgaattt
accaaaatagaattgcccgttctgtatttcagggtggtttgttcaaccggcacctatatc
cgtagcctggccaatgatgtgggtaaagccgctggttgtggcgcctatcttagcagcctg
tgccgcacgcgcattggggagtttagtttagataaatctatgacgatggaagaagcgatg
gcgtggatagaaggaatgaaaagatga
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