Niastella koreensis: Niako_2292
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Entry
Niako_2292 CDS
T01679
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nko
Niastella koreensis
Pathway
nko03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Niako_2292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nko03019
]
Niako_2292
03110 Chaperones and folding catalysts [BR:
nko03110
]
Niako_2292
03029 Mitochondrial biogenesis [BR:
nko03029
]
Niako_2292
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nko04147
]
Niako_2292
Enzymes [BR:
nko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Niako_2292
Messenger RNA biogenesis [BR:
nko03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Niako_2292
Chaperones and folding catalysts [BR:
nko03110
]
Heat shock proteins
HSP60 / Chaperonin
Niako_2292
Mitochondrial biogenesis [BR:
nko03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Niako_2292
Exosome [BR:
nko04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Niako_2292
Exosomal proteins of other body fluids (saliva and urine)
Niako_2292
Exosomal proteins of breast cancer cells
Niako_2292
Exosomal proteins of colorectal cancer cells
Niako_2292
Exosomal proteins of bladder cancer cells
Niako_2292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
TetR_C_41
Motif
Other DBs
NCBI-ProteinID:
AEV98639
UniProt:
G8TJA6
LinkDB
All DBs
Position
2765220..2766842
Genome browser
AA seq
540 aa
AA seq
DB search
MAKQIEYELDARKKLKTGVDRLAKAVIITLGPRGKNVVFEKMDGTPQMSCDGVTVAKQIE
LEDPIEDMGVKMIRDAAIRIAEAAGDGTTTSTLLAQTMIDMGLKKVEAGINAMEIKKGID
KGVKAITGKLKQMAITVGTDSSRIEQVAGISAGNNPDIGKLIADAMRKAGKEGVITIEEA
KGFETYVEVVEGMQFDRGYLSPYFITNSEKMNVVFENAYILIYNKKVSGMKEMIPLLDKI
GQTNEPLIIIAEEVEGEALAVLVVNKLRGVLKVAAVKAPGFGDRRKEMLEDIAVLTGGTV
IAEEKGLKLENAELTHLGRCAKVIITKDKTIIIGGVGDKTSISNAVAQIKEQLKTTTSEY
DKEKLHERLAKLAGGVAVVYVGGSSEIELNIKKDIVDDALNATRAAVEEGIVPGGGVAFL
RCLPELDKIECANDDERTGLEILRKALEEPLKRILINAGIEPAEIVQKVKAGENDFGYNA
KTEQFEQLLETGIIDPVKVSRLALEFAASVAGMFITTECVIVKKPEKKETAIIAADTEIM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaaattgaatacgagttagacgcccgtaaaaaattaaaaaccggcgtagac
aggcttgcaaaagcggtgatcattacattagggccgcgtggtaaaaatgtagtttttgaa
aaaatggacggaacgccccagatgtcgtgcgatggcgttacggttgccaaacaaattgaa
ctggaagatcctatagaggatatgggggtaaaaatgatccgggatgccgctatacggatt
gcagaagcggctggagatggcactaccacttctaccctgctggctcaaaccatgatagat
atggggttgaaaaaagtggaagcagggatcaacgccatggaaataaaaaagggcatcgat
aaaggcgtaaaagccataaccggcaaattgaagcagatggcgattacggttggtaccgac
agttcccgcattgaacaggttgccggtatcagcgcagggaataaccccgacatcggaaag
cttattgcagacgccatgcgtaaagcgggaaaggaaggcgtaataacaatagaagaagca
aaaggctttgaaacgtatgtagaggtggtagaaggcatgcagttcgaccgaggatacctg
tcgccctattttattaccaactccgaaaaaatgaatgtggtctttgaaaacgcctatatc
cttatctataacaaaaaggtgtcgggcatgaaagaaatgatccctttgctggataagatc
ggacaaaccaatgaaccactgatcatcatagccgaggaggttgaaggagaagcgctcgca
gtactggttgtaaataaactgcggggtgtgctgaaagtagctgcagtaaaagctcctggc
tttggcgaccggcgtaaagaaatgcttgaagatattgccgtgttaaccggaggaactgtt
attgccgaagaaaaagggttaaaactggaaaatgcggaattaacacatctgggaagatgc
gcgaaagtgatcataacaaaagacaagaccattattattggcggcgtcggcgataaaaca
agtatcagcaatgccgtagctcagataaaagaacagttgaaaacaactacctcggagtac
gataaggaaaagctgcatgaacgcctggcaaaactggcggggggtgttgccgttgtgtat
gtgggcggttcgtcagaaattgaactgaacataaaaaaggacattgtcgatgatgcgctt
aatgccacccgcgcagctgtggaagaagggattgtaccgggtggtggcgtagcctttctt
cgttgcctgcctgagctagacaaaattgaatgcgccaatgatgatgaaagaactggcctg
gagattttaaggaaggcgctggaagaaccacttaaaagaatattgataaacgcgggcatc
gaacctgccgagatcgttcagaaagtaaaagcaggcgaaaatgattttggatataacgcg
aaaactgaacaatttgaacaattgctggaaaccggcattatagacccggtaaaagtttcc
cggttggcattggagtttgccgcttccgtagccggtatgttcatcactaccgaatgtgtt
attgtaaagaagcccgaaaaaaaggaaacggccataattgctgccgataccgaaataatg
tag
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