Niastella koreensis: Niako_2401
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Entry
Niako_2401 CDS
T01679
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
nko
Niastella koreensis
Pathway
nko02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Niako_2401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nko03021
]
Niako_2401
Transcription machinery [BR:
nko03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Niako_2401
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
GerE
DUF1492
HTH_11
DUF722
Herpes_IE1
HTH_23
UPF0122
MarR
RasGAP
HTH_38
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AEV98745
LinkDB
All DBs
Position
complement(2975597..2976196)
Genome browser
AA seq
199 aa
AA seq
DB search
MTEREIIEGLKGNQQLAFDRVFDEFFPQLQFFATRVTGDAEEARDIVNQVFLSLWKLRSR
FETLVNIKAFLYITTRNHCFNYLRHRQRQETVKKEYGNSLEDVADEQNMELRMIETEVMK
KVYEKIEELPDKCKQIFKLTYLEGLQAGEIAQKLNISTSTVTTQRHIGIKYLRAVLSEED
FLVLLLLINGSLSLIPHFA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacgagaaattattgagggcttaaagggcaatcaacaattggcattcgaccgg
gtatttgacgaatttttcccacaattgcagttttttgccacccgggtgaccggtgacgca
gaagaagcgcgggatatagtgaaccaggtatttcttagtttgtggaaacttaggtcccgt
tttgagacattggtgaacattaaggccttcctttacattacaacgcgcaatcattgtttt
aattacctgcgccaccggcaaagacaggaaacggttaaaaaagagtatggtaacagtctt
gaagatgtagccgacgagcagaatatggagctgcgcatgatcgagacagaagtaatgaaa
aaggtctatgaaaagatagaggaattacctgacaaatgcaagcagatatttaaactgact
tatttagaaggattgcaagccggtgaaatagcccaaaaactcaacatctctacaagcact
gtcaccacccaaagacatattggcatcaaatacctgagagccgttttatcggaagaagac
tttctcgttctattgctgttaattaacggcagtctatcgttaatcccacactttgcttga
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