Niastella koreensis: Niako_3429
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Entry
Niako_3429 CDS
T01679
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
nko
Niastella koreensis
Pathway
nko02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Niako_3429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nko03021
]
Niako_3429
Transcription machinery [BR:
nko03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Niako_3429
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
HTH_23
Sigma70_r4
HTH_40
GerE
HTH_11
HTH_16
Motif
Other DBs
NCBI-ProteinID:
AEV99733
LinkDB
All DBs
Position
complement(4298349..4298924)
Genome browser
AA seq
191 aa
AA seq
DB search
MEKDLCMRIADGDEEAFASLFNRYYPLLRPFILKFTHSADKTEEMLQETFLRVWLNRDQL
PGVENLQAWIFTIASRQCLHAIRTELNHRKKLAAMQIRESDRESDTPLDATQLAEINRLV
TQAVNNMPPQRQRIYRMSREQGLKPAAIAEALSLSVTTVKNSLVAALKDIRQHLGAAGHT
ISLLVVLKMFF
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagatttgtgtatgcggatagcagacggtgacgaagaggctttcgccagcctg
ttcaaccggtattatcctttattacgtccttttatattgaagtttacgcattctgcagac
aaaacggaagagatgctgcaggagacctttctgcgcgtatggctgaaccgggaccagctc
cccggagtagaaaacctgcaagcctggatctttaccattgcctcccgccagtgtttacat
gctatcagaactgaactgaatcatcgcaaaaaattagctgccatgcagatccgggaaagc
gaccgggaatcggatacgccgctggatgctacgcagttagctgagataaaccggctggta
acacaggccgttaataatatgccaccccaacgccagcgcatttaccgcatgagccgggag
cagggacttaaacccgccgctattgccgaagcactctcattatcagtaactaccgtaaag
aattcactggtggctgccctgaaagacatccgtcagcacctgggtgcggccgggcatacc
atcagccttctggtggtgctgaaaatgtttttttaa
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