Niastella koreensis: Niako_3501
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Entry
Niako_3501 CDS
T01679
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
nko
Niastella koreensis
Pathway
nko02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Niako_3501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nko03021
]
Niako_3501
Transcription machinery [BR:
nko03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Niako_3501
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
DUF722
DUF6079_2nd
PF0610-like_N
HTH_ParB
Bac_DNA_binding
HTH_40
HTH_3
HTH_Tnp_ISL3
HTH_19
Dimerisation2-like_dom
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
AEV99802
LinkDB
All DBs
Position
complement(4380271..4380882)
Genome browser
AA seq
203 aa
AA seq
DB search
MPLDNLYTDRELLAQVANGDKLAFRQLFDLYKLRLYAFVLQLTHSKVDAEEIVQDVFTKL
WESRTSLLHVEYPGKYIYTIARNKTLNHLTRLARDRQLLQQVWLNVSHVDNPTEAILQAQ
ESQRLIDEAISRLSIQRQTIFKLSREQGFTHEEIAARLDLSKSRIKNILVEILKHIKDHL
AHYATLVSALCWISYSLFGNFAL
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
gtgccattggataatttatataccgatcgggaattactggcacaagtggccaatggggat
aaattagccttcaggcagttatttgacctgtacaagctacggttgtatgcctttgtattg
caattgacccattcaaaagtagatgcagaagaaattgtgcaggatgtgttcactaaatta
tgggaatcccgcaccagcctgttgcatgttgaataccctggtaaatatatatacaccatc
gcacgtaataaaacattgaaccatttaaccaggctggcccgcgacaggcagttgcttcag
caggtttggttgaatgtatcacatgttgataatcccactgaagccatattacaggcgcag
gaaagccagcggctgattgatgaggccataagccggctatccattcaacgtcaaacgatc
tttaaactaagccgtgagcagggatttacccatgaagaaatagctgcccggttagatctc
tccaaaagcaggataaagaatatcctggttgaaatattaaagcatataaaagatcatctc
gcgcattatgctactctggtatccgcattatgctggataagctacagtctttttgggaat
tttgccctgtaa
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