Niastella koreensis: Niako_3935
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Entry
Niako_3935 CDS
T01679
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
nko
Niastella koreensis
Pathway
nko02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Niako_3935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nko03021
]
Niako_3935
Transcription machinery [BR:
nko03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Niako_3935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
TPR_PSMD3_N
M3K_C
Mycobacteriophage_Gp53
TnsD
Motif
Other DBs
NCBI-ProteinID:
AEW00218
LinkDB
All DBs
Position
complement(4950881..4951462)
Genome browser
AA seq
193 aa
AA seq
DB search
MGAETDHILLQLLKMADPQGFKALFQRYYKTLCIQAFLLLQDQGEAEDLVQDVFVKFWQE
RKFEIVQQSLGAYLTTMVKHAALNLLKHKSRVNRKEKTYQERIDIIENTHVMEIQETAQM
VQSVIAQLPEQCKRIFELVCVEGKKYQEAAVIAGVTVNTVKTQLRRAFAKLRESLRDYYY
FTGLSPVLYILLS
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgaaacagaccatatcctactacaattgcttaaaatggctgacccgcaaggg
ttcaaagcgttattccaacggtattacaaaaccctgtgcatacaggcattcctgttatta
caggaccagggcgaagcggaagacctggtgcaggatgtttttgtaaaattctggcaggag
cgcaaatttgagattgtacaacaatcgctgggtgcttacctaaccaccatggtgaaacat
gctgctttgaatttgctgaagcataaaagcagggtgaaccgcaaagaaaagacttaccag
gaacgtattgacatcattgaaaatacccacgtaatggagatccaggaaaccgctcaaatg
gtacaaagtgtgattgcccagctgcctgagcaatgcaaacgtatctttgaactggtttgc
gtggaaggcaaaaagtaccaggaggcagctgttattgccggtgtaaccgtaaatacggtt
aaaacccagctgcgacgggcatttgcaaaacttcgggaaagtctgcgcgactattattat
tttaccggcttgtcacctgttttgtatattttattgtcttaa
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