Niastella koreensis: Niako_3939
Help
Entry
Niako_3939 CDS
T01679
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
nko
Niastella koreensis
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nko01002
]
Niako_3939
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nko01011
]
Niako_3939
Peptidases and inhibitors [BR:
nko01002
]
Cysteine peptidases
Family C82
Niako_3939
Peptidoglycan biosynthesis and degradation proteins [BR:
nko01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Niako_3939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
CC_PcsB
BESS
DUF2379
MapZ_EC1
Motif
Other DBs
NCBI-ProteinID:
AEW00222
UniProt:
G8T9M9
LinkDB
All DBs
Position
4955598..4957238
Genome browser
AA seq
546 aa
AA seq
DB search
MRYIFYLLFTTLLFTGCLNSADNNKNEESESGPAAAKNISSRDLSITKNNSYSDLFLDSS
SLDDFIARHHVADTVANRMISFYNTRNYQYAWFNSDGFTEEAQAFWNLFDHYLTTSGDTS
LVNKTLEKQMNRLVTDSFTVSANDKTMRQTELRLTYSLLKYASRNFEKGYVKRKELERFV
PAKKADPIAIADSLLSKKHKDNKYYEDINASYKSLKAQLQKYVDLNKRGPLPAIPAEAKS
LKKGKSSPHVPIIKQYLQLTGDLPGNDTSRLFNDTLADAITNIQERFGMKGTGTLSKELI
AEMNVPLRDRIEQILINMGRMRWMPSQPNGTLIIINIPEFILHLFENGKKEFDMNVVVGK
DGHSTTQFTGTINQIVFAPYWNIPPRIVTNEILPEIEKNKHYLEENEMEDQGDKDGDGVP
DIRQLPGDKNALGKVKFLFPNSFDIYLHDTPAKSLFNQTKRAFSHGCIRLADAQKMAEYL
LRNDPDWDATRISEAMNAKEQKVVKLKDKAEVFITYYTAWVDDAGRLNFREDVYGHDKKV
RNTLFQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgagatacatcttctatttattattcactaccctgctattcaccggctgtttaaatagt
gcagataacaacaaaaatgaagaaagtgaaagcgggcccgccgccgcaaagaatatcagc
agccgcgatctcagcataacaaaaaacaactcgtattcggatctgtttctggacagctct
tccctggatgattttattgcgcgccatcatgtggccgatacagtggccaaccgcatgatt
agcttttacaatacccgcaattaccagtatgcctggttcaacagcgatggatttaccgaa
gaagcccaggcattctggaacctgttcgatcattatctcaccacctccggcgatacctca
ctggtgaacaaaacgcttgaaaaacaaatgaatcgcctggtgactgatagttttaccgta
agcgccaacgacaaaaccatgcgccagaccgagctgcgccttacctatagcctgcttaaa
tatgcctccaggaactttgagaagggttatgtaaagcggaaagagctggaacggttcgta
cccgctaaaaaagccgatcccattgcaatagctgattccctgctttcgaaaaagcataag
gacaacaaatattatgaagacatcaatgccagctacaagtcgttaaaagcgcagttgcag
aaatatgtggacctaaataaacgcggccccctgcctgctattcccgcagaagcgaagtca
ttgaagaaaggcaaatcatcgccccacgttcccataataaaacaatacctgcaactgacc
ggggacctgccaggcaatgatacctccaggctgttcaacgataccctggcagatgccata
acaaacattcaggagcgatttgggatgaaaggcaccggcacgctgagcaaggagctgatc
gctgaaatgaacgttcccctgcgcgaccgcatagagcagatcctgataaacatgggccgc
atgcgttggatgccttcgcaacccaatggcaccctcattatcataaatattccggaattc
attttacacttatttgaaaatggcaagaaggaatttgatatgaatgtggtggtgggcaag
gacgggcacagcactacccagtttaccggcaccatcaaccagattgtatttgccccctac
tggaatattcccccacggatagtgaccaatgagatcttacccgagatagaaaagaacaaa
cattacctggaagagaatgaaatggaagaccagggcgataaagacggcgatggtgttcct
gatatccggcagctgcctggagataaaaatgcattgggcaaggtaaagttcctgtttccc
aacagctttgatatttacctgcatgatacgcccgccaagagcttattcaaccaaaccaaa
cgcgcgttcagtcatggttgcattcgcctggccgatgcccagaaaatggccgagtacctt
ttacgcaacgatcccgactgggacgccaccaggatctcagaagccatgaatgccaaagaa
cagaaagtggtaaagctgaaagacaaggcggaagtgtttatcacttattataccgcctgg
gtggatgatgcagggcgcctgaacttcagggaagatgtgtatgggcatgataagaaggtt
agaaacacgctgtttcaataa
DBGET
integrated database retrieval system
