Niastella koreensis: Niako_4191
Help
Entry
Niako_4191 CDS
T01679
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
nko
Niastella koreensis
Pathway
nko02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Niako_4191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nko03021
]
Niako_4191
Transcription machinery [BR:
nko03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Niako_4191
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
GerE
Sigma70_ECF
Sigma70_r4
HTH_40
HTH_23
HTH_11
Sigma70_r2
HTH_10
HTH_24
DUF3080
PF0610-like_N
TnsD
HTH_28
HTH_38
HTH_5
HTH_20
DUF722
RPA_C
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AEW00465
LinkDB
All DBs
Position
complement(5261653..5262222)
Genome browser
AA seq
189 aa
AA seq
DB search
MNSTIDILAIREGDEKAFVDMYYLLNGKVYNFFLKRTRHSEAAKELTQQCFIRIYNYRAS
LSLLHPPEKQVYIIAKSVLLNHLRQEDRKAARELTYANQMYPVGANTSDNENTGFETQDL
LEKITQHLPPVRKKVILLKARQGLSNKEIATQLSISVKTVENHLAKATRQLRVLSPDLLL
ILTILFFEC
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcacaatagacattttggcaatccgggaaggagatgaaaaagcctttgtggac
atgtattatcttctgaacggaaaagtgtataacttctttctgaaaaggacccgtcattca
gaagcagcgaaagaacttacccagcaatgtttcatccgcatttataattaccgcgcttca
ctttccttactgcacccaccagaaaaacaggtatatattattgccaaatctgttctgctc
aatcaccttcggcaggaagaccggaaagctgcccgcgaacttacctatgcgaaccaaatg
tatccggtgggagccaacaccagcgacaacgaaaataccggttttgaaacccaggacctg
ctggaaaaaataacccaacacctaccgccggttcgcaaaaaagtaattctgctcaaagcc
cgccagggcctttccaataaagaaatcgccacacaattatccatttcggtaaaaacggtg
gagaaccatcttgccaaagctacccggcaactgcgggtcctttctcccgatttactgctt
attctgactatccttttttttgaatgttaa
DBGET
integrated database retrieval system
