Niastella koreensis: Niako_4375
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Entry
Niako_4375 CDS
T01679
Name
(GenBank) transcriptional regulator, LysR family
KO
K21900
LysR family transcriptional regulator, transcriptional activator of the cysJI operon
Organism
nko
Niastella koreensis
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nko03000
]
Niako_4375
Transcription factors [BR:
nko03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Niako_4375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
Motif
Other DBs
NCBI-ProteinID:
AEW00635
UniProt:
G8TH24
LinkDB
All DBs
Position
5469288..5470196
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AA seq
302 aa
AA seq
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MLSYSHEVFFEVATNLSFSKAADILYISQPAITKHIQSLEKHYKISLFERKGNSVSLTSE
GKILLEYVVKGRELQRQLEFDISKQKDLQLAKGSFTLGTSTTISLYVIPPVFSAFHQQYP
NIDLKLVNRNSENILKALLDHEIDLAITEGRNTITSVKYQFFLTDEVIPVCSAKSSLVKK
KNIAPDELKTIPVALRERGSGTLSAVTEALQKCKLSIADLQHKIVLGGTEALKNFLLDDT
CLGFLPLRSVARQLKNGELVRLTIPGLTIHRSFYFMQRRGSEADRINQLFIKLATSHYNK
KL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgcttagttacagtcacgaagtatttttcgaggtagccactaacctcagcttttcaaaa
gctgccgatatcctgtacatcagtcagcctgcaattaccaaacacattcagtcgctcgaa
aaacattataagatcagtttgtttgaacgcaaaggcaatagcgtatcactcaccagcgaa
ggaaagatcctgcttgaatatgtggtaaaaggccgcgaactgcaacgccagctggagttc
gacatcagcaaacaaaaagacctgcaactggccaaaggatcgtttaccctgggtaccagc
actactatatctttatacgtcattccccctgttttttccgcctttcaccagcaatacccc
aatatcgatctgaagctggtgaaccgcaactccgaaaacatattaaaggccctgctggat
catgaaattgacctggcgattaccgaaggccgcaataccattacttcggtgaaataccag
ttctttttaacagatgaagtaatcccggtgtgcagcgccaaaagcagcctggtaaagaaa
aaaaacattgcccccgatgagttaaaaaccataccggtagccctacgcgaaagaggttcg
ggcaccttatcggccgtaacagaagctttacaaaaatgtaaactcagcatagccgacctg
caacacaaaattgttttaggcggcaccgaagcgttgaagaatttcctgctcgacgatacc
tgtctcggctttttaccattgcgttcagtagcgcggcaactgaaaaacggtgaactggtt
cggttaaccattcctggtttaaccatacatcgttccttttattttatgcaacgccgcggc
tccgaagcagaccgtatcaatcaactctttataaaactcgccaccagccattataacaaa
aagttatag
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