Niastella koreensis: Niako_4926
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Entry
Niako_4926 CDS
T01679
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
nko
Niastella koreensis
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nko03016
]
Niako_4926
Enzymes [BR:
nko01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Niako_4926
Transfer RNA biogenesis [BR:
nko03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Niako_4926
Prokaryotic type
Niako_4926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AEW01166
UniProt:
G8T7D0
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All DBs
Position
complement(6077532..6078443)
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AA seq
303 aa
AA seq
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MLAVTILGNNSALPAYDRHPTSQVVTLDDNLFLVDSGEGTQQQLVKYRIRWSRINYIFIS
HLHGDHYFGLPGLLHSMGLLHRENELHLFAPAPLKQILDLQLEAASNQLSYPLYFHPLEG
EGVIVQNDKFRVTCFATKHRIPCWGFRFDQVRAPRRVNPEKAIEYGVPAAFYDRLKWGED
YTTKSGELIENELVTNPGVKPLSYAYCADTIYDEELIEKVKGVDLLYHETTYLKDLEMRA
AMRFHSTTQQAARIAKNANVGRLLIGHFSSKYDKLEVFEQEAIEVFPNTSLALEGVTFRA
PQK
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgctggctgttactatactgggaaataattctgccttaccggcgtacgaccggcatccc
acgtcgcaggtagtgacgctggatgataatttgttcctggttgatagtggcgaaggcacc
cagcagcaactggtgaaataccgcatccgctggtcgcgcatcaactatattttcatttcc
cacctgcatggcgaccactattttggtttaccgggtttactacacagtatggggctgctg
catcgcgagaatgagctgcatttatttgccccggctcctttaaaacaaatactggactta
caattggaggctgcctccaatcaattgtcgtaccccctgtattttcatccgttggaaggg
gagggcgtgattgtacagaacgataaattcagagtaacctgttttgccaccaagcaccgc
attccctgctggggtttcaggttcgaccaggtgcgggcgccgcgccgcgttaatcctgaa
aaggcgattgaatatggcgtaccggccgcgttttacgaccgccttaaatggggggaagat
tatactaccaaaagcggggaactgatagaaaatgaactggtgaccaatcccggcgttaag
ccgttgtcatacgcctattgcgccgataccatttatgatgaagaactgatagaaaaggta
aaaggcgttgacctgctataccacgaaacaacttacttaaaagacctggaaatgagggct
gccatgcgttttcactccactacccaacaggctgcccggattgccaaaaacgccaacgta
gggcgtttgctcataggtcattttagctcaaaatacgataagctggaggtgtttgaacag
gaagccatcgaggtgttccccaataccagcctggcattggaaggtgttacgtttcgtgct
ccgcagaaatga
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