Niastella koreensis: Niako_4934
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Entry
Niako_4934 CDS
T01679
Name
(GenBank) TonB-dependent receptor plug
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
nko
Niastella koreensis
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nko02000
]
Niako_4934
Transporters [BR:
nko02000
]
Other transporters
Pores ion channels [TC:
1
]
Niako_4934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
CarboxypepD_reg
TTR_TEN1-4
FERM_C
Motif
Other DBs
NCBI-ProteinID:
AEW01174
UniProt:
G8T7D8
LinkDB
All DBs
Position
complement(6093196..6096360)
Genome browser
AA seq
1054 aa
AA seq
DB search
MRMKKQFYFVGRLCLLSFLALLISTLTFSQNRPISGKVTDAKDGTPLPGVSVQVKGQNTG
ATTDINGSFTISAVPGATLTFTHTGYEGFQVKVGEQESLNVQLQLSKGSMSEVVVIGYGT
ARKKDLTGSVGSVKASQLQERPAASVNEALSGRIPGVQVNTNSGRPGGQTSIRIRGFSSI
NSSNNPLYVVDGVYIPIGNQTLNSNSIDYINPNDIASVEVLKDASGTAIYGARGANGVVL
ITTKRGTNGPAKVTYDGNYSVPTIGPHRVHMLNAQQYLDLEDLAFDNIKVYDPDGWAAGV
YSQAVDPRVKRKSLPTMFDANGKPLYNTDWMKESLQHKLSQNHQVGVTGGSDNNLYGLFL
NYRDDNGLLLNSYLKRYAARFVLDMKPKEWLRMGGSISYNNQEENLVDQGTGGLNSVRMI
TESFPFLPVKFADGSWGDNYLYPGAEGGSNPVHIMTDRKYIVDVQSMLGHSYINLLLGNG
FDIKSQVGVSLIQRQENQFSGRGLSNISMDQQGTASIFDNREVYWSSETFLNYNKSFHGG
DHTVSGLVGLSWQGTNYVSNNSSAQTFSTDFFQYNNLGQGSVQNASSSGKSNFAFNSYFG
RVNYGYKQKYMLTVTGRIDGSSKFGDNHKYAFFPSAGLAWNASNEDFLKSNKVISHLKFR
VSTGLTGNSEIAPYSSDALLGSYAGIFNNARFSGIGTGRLGNPDLKWEKTAQTDAGIELG
VLENRINLEFDAYYRKTTDMLLDAPLPRSTGYSSFFRNVGSMENKGIEIGLKTVNIKTQD
FSWNTTFNISFNRNKVLSLATPAPIFSGNPNFLSNTGIIQVGQPVGSFWGLIREGVWTES
ERAEAAKYSSQSYRGGKPILPGDLKYKDINGDYAINDLDRVIIGNGNPKGWGAFSNDFSY
KNFDLLVELSFMYGNDILNQTHHSGEDRTGIANSFSSVLNYYQPGKNDHNTMIATIRDTR
AGYVTNVDTRWIEDGSFLRGKNLLLGYNVPAKIYERWKLSKLRVSASVQNFFLKTKFSGN
DPEVTTYSNAFAQGQTFFDYPKPTTYMLSINVGL
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatgaaaaagcagttttatttcgtcggacggctatgtctgctaagctttctcgca
ctattaatttcaaccttaacgttttctcaaaaccgcccaataagcggtaaggtgactgat
gccaaagacggtaccccattgcccggtgtatcggttcaggtaaaaggtcagaacacggga
gccactaccgatattaatggtagtttcacaatcagtgcggtacctggcgctacactcacg
tttacccacacgggttacgaaggctttcaggtaaaggtaggggagcaggaatccctcaat
gttcaattgcaattaagtaaagggtcaatgagtgaagtggtggtgattggttatggtacc
gccaggaaaaaagaccttactgggtctgtaggttcggtaaaagcctcgcaactgcaggaa
cggccggcagcttcggtgaacgaagcattatcaggtcgtattccgggtgtacaggttaat
accaactcaggccgccccggtgggcaaacctctatccgcatccgcggtttcagttctatc
aactcctcgaacaacccgctgtatgtagtggatggggtgtatatacccatcggcaaccaa
accctgaacagtaattctatcgactacattaacccgaatgatattgcttcggtagaagta
ctgaaagacgcatcgggaacggccatatatggcgcccgtggtgccaatggcgtagtgctt
attaccactaaacgtggtaccaacggaccagcaaaagttacttatgatggtaattacagt
gtgcctactattggtccccatagagtgcacatgctgaatgcacagcaatacctggatctg
gaagatctggcctttgataatataaaagtgtatgatccggacggttgggctgcaggcgtt
tattctcaggctgtagacccaagggtaaaaagaaagagcctgcctaccatgtttgatgcc
aatggcaagcctttgtataataccgactggatgaaagaatctttacagcataagctttca
caaaaccatcaggtaggtgttaccggcggaagcgacaataatttatatggtctgttcctg
aactatcgcgatgataatggattactgcttaattcttatctgaaacggtatgccgcgcgc
tttgtgcttgacatgaaaccgaaagagtggttgagaatgggcggtagcattagctataat
aaccaggaagaaaacctggtagaccagggtactggcgggttgaactctgtgcgtatgatc
acagaatcattcccctttttgccggttaagtttgcagatggcagctggggcgataactac
ctgtacccaggtgctgaaggtggtagcaacccggttcacattatgaccgatagaaaatat
attgtggatgtgcagagcatgctcgggcattcctatataaaccttttactcggcaacgga
tttgatatcaaaagccaggttggggtgagtttgatacaaagacaggaaaaccagttcagc
ggccgggggctttccaacatctccatggaccaacaaggtaccgccagtatttttgataac
cgtgaagtatactggtcaagtgagaccttcctgaactacaacaaatcttttcatggcggc
gatcataccgtgagtggcttggtaggactttcctggcagggaacaaactatgtttccaat
aattccagtgcccaaaccttttctacagactttttccagtataataacctgggccagggt
agtgtgcagaacgcatcgagctcaggcaaaagcaatttcgcgttcaactcttattttggc
cgcgtgaattatggctacaagcaaaaatacatgttgacggttaccggtcgtattgatggt
agttcaaaatttggtgacaaccataagtacgccttcttcccttcggctggtttggcctgg
aatgccagcaacgaagattttcttaaaagcaataaagttatctcccatcttaaatttcgg
gtaagtaccgggttgacaggaaactcagaaattgcgccttattcatcagacgccttactg
ggttcctatgccggtattttcaacaacgcccggttctctggtattggtaccggcaggtta
ggtaaccctgacctgaagtgggaaaaaaccgcccagacagatgctggtattgaactgggt
gtactggaaaacaggatcaacctggaatttgatgcatactatcgcaaaaccacagacatg
ttgctggatgcaccattgccaagatcaaccggttattcttcatttttccgcaacgtaggc
agcatggaaaacaaggggattgaaattggtttgaaaacggtaaatatcaaaacccaggac
ttctcctggaacaccacttttaatatttccttcaacagaaataaggtgctttccctggct
acgccggcccccatcttctcaggtaatccaaactttttatcaaacactggtatcatccag
gttggccaacctgttggttcattctggggcctgatacgcgaaggggtatggacagaatct
gaaagagcagaagctgcgaaatactcaagccagagttaccgtggcggtaaacccattttg
ccgggcgatttgaaatacaaggatataaatggtgattatgccatcaatgacctcgacagg
gtgatcattggtaatggtaatcctaaaggctggggtgctttcagcaatgatttcagctat
aagaatttcgacctgcttgttgagctttctttcatgtatgggaacgatatcctgaaccaa
acgcaccactccggtgaagaccgtacaggtattgctaacagcttcagttcagtactgaat
tattatcagcctggtaagaacgatcacaataccatgatcgctactattcgtgatacccgc
gccggttatgtaaccaatgtggatacccgctggatagaagatggttcgtttttgcgtgga
aaaaacctgttactcggctataatgtaccagccaaaatatatgagcgctggaagctgagc
aagctgcgggtaagcgcttctgtgcagaatttcttcctgaaaacaaagttctcgggtaac
gatccggaggtgactacttatagtaatgcctttgcacagggccagactttctttgattat
cccaaaccaacaacatacatgctaagcataaatgttggattgtaa
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