Niastella koreensis: Niako_5570
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Entry
Niako_5570 CDS
T01679
Name
(GenBank) O-antigen polymerase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
nko
Niastella koreensis
Pathway
nko00540
Lipopolysaccharide biosynthesis
nko01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Niako_5570
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
nko01005
]
Niako_5570
Enzymes [BR:
nko01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
Niako_5570
Lipopolysaccharide biosynthesis proteins [BR:
nko01005
]
Core region
Niako_5570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
LrgA
DUF8070
Motif
Other DBs
NCBI-ProteinID:
AEW01802
UniProt:
G8TII6
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All DBs
Position
complement(6948687..6949991)
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AA seq
434 aa
AA seq
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MRSLFLMDEQAGLLTIKDKLLYVLVVIFFITFYPSHISAVNVVALVILSLYSFVIYGSFR
EKWQLLRQRKEVLAMAAFYLLHIVSSLCSKNVAEGFSWTVIRMPLFVFPVSMGLVYIKQA
LKERILFAYAVITTITVLFCFIWGIVASLVYNDSSLVYNDNLTAPIDKQSIYIALLANIA
IFSFAYLLYIKSPLVAKKGLLYASLFILLMAIFFLASRIALITLLGSTVCVAVWYIIHKR
KLKLLGLVGAGIALVLVLLITVFPKTWNRFEELGFTHYEYAHKGEESHFDMPVTADQWNG
ANIRLAIWHCGWSLVKQHPAFGVQVGDKVDRMMETYKARDFDFAYETRRNTHNNYLDIMV
AFGFTGLLLFLWGFIFEPLRQCIRHKDFFGVFVIAAFMLSFIPETYFDRSMGNMVFAFFI
AFIVSYRKPVAAIV
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcgatccttgtttttgatggatgaacaggcgggtttattgactataaaggataaatta
ttatatgtgctggtggtcattttctttatcaccttttatccgtcacatatctccgcagta
aatgttgtggcgttggttattctgtcgttatacagctttgttatttatgggtccttccgc
gaaaaatggcaactgctgcgccagcgaaaagaggtgttggcgatggctgctttttatttg
ctgcatatagtaagttcgctttgctcaaaaaatgtggccgagggtttttcctggacggtg
atccgcatgcctttattcgtgttccccgtttccatggggcttgtgtatataaaacaggca
cttaaagaaaggatcctgtttgcctatgcggttattactaccattacggtgctgttctgt
tttatctggggtattgtggcaagcctggtgtataacgactcctcgttggtgtataatgat
aatcttaccgccccaatagataaacaatcgatctatattgccttactggccaatatagcc
attttcagttttgcatacctgctgtatataaaatcgccgctggtggctaaaaagggactg
ctgtatgcgagtttgtttattttactgatggctattttctttttagccagccgtattgcg
ttgataaccttattgggcagtactgtatgtgtggcggtatggtatattattcacaagaga
aagctgaagctgctgggtttggtgggggctggtattgcgttggtgttggtgttgctgata
actgttttcccaaaaacatggaaccgttttgaagagctggggttcacccactacgaatat
gcacacaagggagaggaaagtcattttgatatgccggttacagccgatcagtggaatggc
gccaacatcaggctggcgatatggcattgtggatggtcgctggtaaaacaacaccccgct
tttggcgtacaggtaggggataaggtagacaggatgatggaaacgtataaagcaagggat
tttgattttgcttatgaaacccgccggaacacgcataacaattacctcgatataatggtg
gcctttggatttaccgggttactgcttttcctgtggggatttatatttgaacccctgcgc
cagtgtattcgccataaagacttttttggcgtgtttgtaattgcggcctttatgctctca
ttcatccccgaaacctatttcgaccgcagtatgggcaatatggtgtttgccttctttatt
gcttttattgtcagctacaggaagcctgtagctgcaattgtttag
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