Niastella koreensis: Niako_6289
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Entry
Niako_6289 CDS
T01679
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nko
Niastella koreensis
Pathway
nko03030
DNA replication
nko03410
Base excision repair
nko03420
Nucleotide excision repair
nko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Niako_6289
03410 Base excision repair
Niako_6289
03420 Nucleotide excision repair
Niako_6289
03440 Homologous recombination
Niako_6289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nko03032
]
Niako_6289
03400 DNA repair and recombination proteins [BR:
nko03400
]
Niako_6289
Enzymes [BR:
nko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Niako_6289
DNA replication proteins [BR:
nko03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Niako_6289
DNA repair and recombination proteins [BR:
nko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Niako_6289
NER (nucleotide excision repair)
GGR (global genome repair) factors
Niako_6289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
RNase_H_2
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AEW02514
UniProt:
G8TCH4
LinkDB
All DBs
Position
7780189..7783050
Genome browser
AA seq
953 aa
AA seq
DB search
MENQSTEKKVFLLDALALIFRAYYALIRNPRITSKGKNTNAQFGFINTLLDLINNQKPTH
MAVCFDTQAPTERHTEFSEYKANRQESPEDLMAAIPDIKRIIRGFNIPVLEVDGFEADDV
IGTLSKKGAAAGYVVYMVTPDKDYGQLVDGNIKIYKPGYQGGDAEILGAKEVCEKWNIKE
VHQVIDILGLMGDAVDNIPGIAGVGEKTAAKLLAEYGTLENVLENADKIKGALGEKVRNG
RNAAILSKKLATIITDVPIEFHEEDFKLKEWNRDLLKEVFTELEFKTVAKRILGEEISIV
PGAVPQGVQTDLFGQPVEAGKTKPAKSEQTEVAGDTDRAEDGDIVHAGKNIHNTAHQYRT
IQEDAAIQSLIKELLEEKEICFDTETTGIDANDVELVGMSFSFKPGEAYYVPCPADQQAA
HALLKQFEPVFNRPDVLWIGQNLKYDMLVLKWYGYELKGETFDTMLAHYVIEPDGKRSMD
MLSAQFLGYEPVHIEELIGKKGKNQLNMRDVAIDKISDYAAEDADITLQLKQVLAPLIKT
REVEKVFSEVENPLAKVLMGMEYEGVKVDVDFLRDYSKELEREAAKAEDSVYEQAGVKFN
LASPRQLGEVLFERLKLDPKAKKTKTGQYATGEDVLLKLASQNKIVEDILAFRELTKLKS
TYVDSLPELINRKTGRVHTSYAQAVAVTGRLSSNNPNLQNIPVRTERGREIRKAFVPRDS
NRVLISADYSQIELRIVAGISGDPAMCEAFKKGVDIHTATAAKVYGVEESAVTKEQRYKA
KSVNFGIIYGQGAFGLADNLGISRTEAKEIIDNYKKQFAGIQKYMDDTINFARETGYVQT
IMGRKRWLRDIGSSNFTVRGFAERNAINSPIQGTAADMIKLAMVKIYHEFRKYNFESRMI
LQVHDELVFDAVKEEVETIKPIILECMRSALPLPNEVPVEAEIGSGTNWLEAH
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcaatctactgaaaagaaagtttttttgctcgacgccctggcgctgatcttt
cgtgcatactatgcattgatccgcaacccacgaattacttcaaaaggaaagaacaccaac
gcccagtttggtttcatcaataccctgctcgatctcataaacaatcaaaagccaacgcat
atggctgtttgttttgacacgcaggcccctactgaacggcatactgaattcagcgagtat
aaggcaaaccgccaggaatcgccagaagacctgatggcggccattcccgatataaaaaga
attatccgtggttttaacatccccgtgctggaagtagatgggtttgaagccgatgatgtt
attggcaccctgagtaaaaaaggagctgctgccggctatgtagtgtacatggtaacgcca
gataaagattatggtcagttggtagatggtaacattaaaatttacaaacccggttaccag
ggcggtgatgctgaaattctgggcgcaaaagaagtttgtgaaaaatggaacatcaaagaa
gtgcaccaggttattgatattctcggtttaatgggcgatgcagtggataacattccaggt
attgccggtgtaggagaaaaaacagccgctaaactgctggcggaatacggtacgctggaa
aatgtgcttgaaaatgccgacaaaataaaaggggccctgggtgaaaaagtgcgtaatggc
agaaacgccgccatcctttctaaaaagctggctactattattacggatgtgcccattgag
tttcatgaggaagatttcaagttaaaagaatggaaccgcgatctgctgaaagaagtgttt
accgagttggaatttaaaacagttgccaaacgcattctgggcgaagagatctccatagta
cccggcgcagtaccacaaggagttcaaaccgacttgtttggccagccggtagaagcagga
aaaacaaagcccgctaaatcagaacaaacagaagtggcaggcgataccgaccgggccgaa
gatggcgacattgttcatgcgggtaaaaacattcataataccgctcaccaataccgcacc
atccaggaagacgcggctatccaaagtctcataaaagaattactcgaggaaaaagaaatc
tgcttcgacaccgaaaccacaggcatagatgccaatgatgtagagctggtgggtatgagc
ttctccttcaaacccggcgaagcttattacgttccctgcccggccgatcagcaagccgca
catgctttactgaagcagtttgaacctgttttcaacagaccggatgtactgtggattggc
cagaacctgaaatacgatatgctggtgttgaagtggtatggttatgaattaaaaggcgaa
acttttgataccatgcttgctcactatgtaattgagcccgacggcaaacgcagcatggac
atgctcagcgcccaatttctgggttatgagcccgttcacattgaagaattgattggcaag
aaaggcaagaaccagttgaacatgcgcgatgtagccattgataagatcagtgactacgcc
gccgaagatgccgatattactttacagttgaaacaggtgctggcgccgcttataaagacc
agggaagtagaaaaagttttcagtgaggtggaaaacccattggcgaaagtgctcatggga
atggaatatgaaggcgttaaagtggacgtagatttcttacgcgactattcaaaggagctg
gaacgcgaagccgccaaggcagaagacagcgtgtatgaacaggctggcgttaaattcaac
ctggcttcgccccgtcagttgggtgaagtactttttgaaagattaaagctcgatcccaaa
gcaaaaaaaacaaagaccggccaatacgctactggtgaagatgtattgttaaaactcgcc
agccagaacaagatcgtggaagacatcctggcgttccgtgaactcaccaaattgaaatca
acctacgtagactcactgcctgaacttattaatcgtaaaacgggaagagtgcatacttcc
tacgcacaagccgttgcggtaacgggccgcctctccagcaacaaccccaacctgcaaaac
attcctgttcgtacagaaagaggccgcgagattcgcaaagcatttgtaccacgcgatagc
aaccgcgtattgatctccgccgactattcgcaaattgaattgcgtattgttgccggtatc
agcggcgaccccgctatgtgcgaagcctttaaaaagggagttgacattcataccgctact
gccgcaaaagtatatggtgtggaagagtcggcagtaaccaaggaacaacgctataaagcc
aagagcgtgaactttggtatcatctatggccagggggcgtttggtttggccgataacctg
ggcatcagccggactgaagcaaaagaaattatcgataattataaaaaacagtttgccggc
attcaaaagtatatggatgacaccatcaactttgcccgcgaaaccggttacgtgcaaaca
atcatggggcgtaaacgttggttgcgcgatattggttcttccaactttaccgtgcgtggt
tttgcagaacgaaacgccatcaactctcctattcagggaacggcggctgatatgatcaag
ctggcgatggtgaagatctaccatgaattccgcaagtataattttgaatcaaggatgatc
ttgcaggtgcatgacgaattggtttttgatgcagtgaaagaagaagtggagaccatcaaa
cccattatccttgaatgtatgcgcagcgcactgccattacccaatgaagtgcctgtggaa
gcagaaataggatcaggcaccaactggctggaagcgcattaa
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