Niastella koreensis: Niako_7138
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Entry
Niako_7138 CDS
T01679
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
nko
Niastella koreensis
Pathway
nko02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Niako_7138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nko03021
]
Niako_7138
Transcription machinery [BR:
nko03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Niako_7138
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
GerE
HTH_40
PhyR_sigma-like
DUF7222
CABS1
Motif
Other DBs
NCBI-ProteinID:
AEW03357
LinkDB
All DBs
Position
8726892..8727485
Genome browser
AA seq
197 aa
AA seq
DB search
MSFQPEYPEIDLLKLVAEGDRNAFTQIYNNYRNKIYSIAYELTESTGVSEEIVQDVFLKI
WVKRETLNEVEHFKAYLFTITRNYVFAALKKIARRESLEVSAMEGAPLYHHDTEDQVQNN
EYTRILQAAIDRLPEQQKQVYNLVKKEGLKREEAAAALQLSPETVKTHLAAAMRSIRTYC
LTRLDVTIALIILMRHY
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatttcaacctgaataccctgagatcgatctactgaagctggttgctgaaggtgac
agaaatgcatttacccagatttataataattaccgcaataagatttactccatcgcctac
gagctcaccgaatcaaccggcgtatcggaagaaattgtgcaggatgttttcttaaagatc
tgggtaaaaagggaaacgctcaatgaagtggagcatttcaaagcctacctgtttacgatc
acccgtaattatgtatttgcagccctgaaaaaaattgcccgcagggaaagcctggaagtc
agcgccatggaaggtgcaccgctgtatcaccacgatactgaagaccaggtgcaaaacaac
gaatacacccgcattttacaagccgccatcgaccgcctgcccgaacaacaaaagcaggtg
tacaacctcgtaaaaaaagaaggcctgaaaagggaagaagccgccgccgcactgcagctg
tcgcccgaaactgtaaagacgcacctggctgctgccatgcgcagcatcaggacctattgc
ctcacccgccttgatgttaccattgcgttgatcattctgatgcgtcactattaa
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