Candidatus Nitrosopumilus koreensis: NKOR_00265
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Entry
NKOR_00265 CDS
T02304
Name
(GenBank) ATPase AAA
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nkr
Candidatus Nitrosopumilus koreensis
Pathway
nkr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
NKOR_00265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nkr03019
]
NKOR_00265
03009 Ribosome biogenesis [BR:
nkr03009
]
NKOR_00265
04131 Membrane trafficking [BR:
nkr04131
]
NKOR_00265
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nkr04147
]
NKOR_00265
Messenger RNA biogenesis [BR:
nkr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
NKOR_00265
Ribosome biogenesis [BR:
nkr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
NKOR_00265
Membrane trafficking [BR:
nkr04131
]
SNARE
SNARE associated proteins
Others
NKOR_00265
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NKOR_00265
Exosome [BR:
nkr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NKOR_00265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
AAA_16
RuvB_N
AAA_2
CDC48_2
AAA_22
AAA_14
TIP49
AAA_5
AAA_33
AAA_28
Sigma54_activat
RNA_helicase
IstB_IS21
nSTAND3
AAA_7
NPHP3_N
ATPase
AAA_24
Mg_chelatase
ATPase_2
ABC_tran
Bac_DnaA
TsaE
AAA_lid_PRS2_C
NB-ARC
NACHT
DUF815
PhoH
AAA_18
Parvo_NS1
ATP-synt_ab
Cytidylate_kin
Zeta_toxin
AAA_3
SLFN-g3_helicase
DUF5906
AAA_17
Motif
Other DBs
NCBI-ProteinID:
AFS79977
UniProt:
K0B4D1
LinkDB
All DBs
Position
complement(57915..60083)
Genome browser
AA seq
722 aa
AA seq
DB search
MSQNALSLKVLEAYTRDVGRGVARIDYDSMDTLNASTGDVIEIKGKRRTVAKCLPLYPSD
EGKGIIRIDGLGRNNSGIAIGDTISVRKIKAVAAEKVVVAPLEAIPPIDERYLADALESV
PLIKGDNVMVPYFGGRLTFQVIGVTPAADAVLITQKTVFHIAEKGETLRGVPQVTYEDIG
GLTDEIKKVREMIELPLRHPEIFEKLGIEAPKGVLLYGPPGTGKTLLAKAVANESNAHFI
SISGPEIMSKFYGESEARLREIFKEAREKAPSIIFVDEIDSIAPKREEVTGEVERRVVSQ
MLSLMDGLEARGKVIVISATNRPNAIDPALRRPGRFDREIEIKVPDKKGRKDILAIHSRN
MPLSDDVNIDKISAVSHGYVGADLEYLCKEAAMKCLRRLLPILNLEEEKIPPETLDKLIV
NHEDFQKALIEVTPSGMREVFIENPDVKWDEVGGLEDVKRELQEAVEWPMKYPALYDKLG
HNMPRGILLHGPSGTGKTLLAKAVATQSEANFVSVRGPELLSKWVGESERGIREIFKRAR
QSAPCVVFFDEIDSIAPIRGAGGETAVTERVVSQLLTELDGMENMHGVVVLAATNRADMI
DPALLRPGRFDKIIQVPNPDKDSRKRILEINAEKIPMGEDVDLEKIAEITDGMSGADAAS
IANTAVSLVIHEYLDKHPDVKDVEKNSIEAKVTMKHFEEAVKKVREQKDLKMGEKLVASY
YR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaatgcactctctctcaaagttctagaggcatacactagagatgttggaaga
ggagtagcaagaattgattatgattctatggacacattaaatgcctccacaggtgatgtt
atagaaattaaaggtaaaagaagaacagttgcaaaatgtcttccactatatccatctgat
gaaggaaaggggattatcagaatcgatggacttggaagaaataattcaggaattgcaatt
ggggatacaatttcagttagaaaaatcaaagcagttgctgcagaaaaggttgtagttgca
ccattagaagcaattccaccaattgatgagagatatcttgcagatgctttagaaagcgtt
cctttgattaaaggggataatgtaatggttccatattttggtggacgtttaacttttcaa
gtaattggagttacaccggctgcggatgcagttttgattactcaaaagactgttttccat
attgcagaaaaaggagaaacattacgtggagttccacaagtaacttatgaagacattgga
ggcttaactgacgagataaagaaagtaagggagatgattgaacttccgttaagacatcct
gaaatctttgaaaagttaggaattgaagctccaaagggtgttttgttgtatggcccacca
ggaacaggtaaaacattgcttgcaaaagctgttgcaaatgaaagtaatgctcactttatc
agtatttcaggtccagaaattatgagtaaattttatggtgaaagtgaagctaggttaaga
gaaattttcaaagaagcaagagaaaaagctccttcaattatctttgttgatgaaatagac
tctattgcaccaaagagagaagaggttactggagaagttgagagaagagttgtttctcaa
atgttatcattaatggatggtttagaagcaagaggtaaagtaattgtaatttccgcaaca
aatcgaccaaacgcaattgatcctgcacttagaagaccaggcagatttgatagagaaatt
gagattaaagttcccgataaaaaaggaagaaaagacattcttgcaattcacagcagaaat
atgccgttatctgatgatgttaatatagataagatatcagcagttagtcatgggtatgtt
ggagcagacttggaatatctatgtaaagaagctgcaatgaagtgtttgagaagattatta
cctattctaaatcttgaagaagaaaaaattccccctgaaactttggataaattaattgta
aaccatgaagatttccagaaggcattgattgaagttactccatctggaatgagagaagtt
ttcattgaaaatccagatgtgaaatgggacgaagttggtggtttagaagacgtaaaacgt
gaattgcaagaagcagttgaatggccaatgaaatatccagcactatatgataagttagga
cataatatgccaagaggaatactacttcacggtccaagtggtacaggtaaaacattgctt
gcaaaagccgttgcaactcaaagtgaagcaaactttgtttcagttagaggtcctgaattg
ttatccaaatgggtaggtgaatctgaaagaggaattagagaaattttcaaaagagcaaga
caatctgcaccatgtgtagttttctttgatgagattgattcaattgcaccaattagagga
gcaggaggagaaactgcagtcaccgaaagagttgtcagtcaattacttacagagttagat
ggaatggaaaacatgcacggagtcgttgtgctagctgcaacaaacagagcagatatgatt
gatccagcattgttaagaccaggcagatttgacaaaattattcaagtaccaaatccagat
aaagatagtagaaaacgtattctggaaattaatgctgaaaaaattcctatgggagaggat
gttgatctagaaaagattgccgaaattactgatggaatgagtggagcagatgccgcatct
attgcaaacacagcagtatcactagttattcacgaatacttagacaaacacccagatgta
aaagatgttgaaaagaacagtattgaggccaaagtcactatgaaacattttgaggaagca
gtaaagaaagtaagagaacaaaaagaccttaagatgggagaaaaactagtagcatcatat
tatagataa
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