Candidatus Nitrosopumilus koreensis: NKOR_00335
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Entry
NKOR_00335 CDS
T02304
Name
(GenBank) transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
nkr
Candidatus Nitrosopumilus koreensis
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nkr03000
]
NKOR_00335
Transcription factors [BR:
nkr03000
]
Prokaryotic type
Helix-turn-helix
Other families
NKOR_00335
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
HTH_IclR
HTH_24
MarR_2
HTH_27
Penicillinase_R
HTH_28
MarR
MerR_2
MCM_C
HTH_34
HTH_9
PLDc_2
PadR
HTH_29
Motif
Other DBs
NCBI-ProteinID:
AFS79989
UniProt:
K0B3F9
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All DBs
Position
complement(68264..69031)
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AA seq
255 aa
AA seq
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MSISDKTRKALEKIGLTSYEIRTFSALLKSGELTASELSQKSGVPYSKIYEVLGTLEEKG
WIGTDDSRPTKYFAKSPSTGLETTKQKMENDFSQNQSVILNELVPLYEKSGTSEKPDIWV
LSGAINIAAKILEMVETCRNEVMIALPEAGEELVKQALPKLRSLHDKGVEITILTSDKMD
KEYIKAIKRVATVKIKKGLFGGGIISDKKYVVILLGPAVAAENSSEVVAIWADHAGLAGF
ARQYFEYLLKDSKKV
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgagcatatctgataagacaagaaaggctttagaaaaaataggtctaacaagttatgag
atcagaacattttctgcattgctaaaatcaggagaactgacagcatcagagcttagtcaa
aaatcaggagtgccatattcaaaaatttatgaagttctaggtactctagaggagaaagga
tggattgggacagatgattctagaccaacaaaatattttgcaaaatcaccgtcaacagga
ctagaaactacaaagcaaaaaatggaaaatgatttttcgcagaatcaaagtgtcattcta
aatgagctagttccattgtatgaaaaaagtggaactagtgaaaagccagacatctgggta
ttatcaggcgcaataaacattgcagcaaagattctagagatggttgaaacatgcagaaat
gaagtaatgattgcgttacctgaagcaggagaagaattagtaaaacaagcattgccaaaa
ttaagatcacttcatgacaagggagtggaaattacaatactcacatcagataagatggat
aaagagtacatcaaagcaatcaaaagagttgcaactgtaaaaatcaagaaaggtttgttt
ggaggaggcatcatttcagataaaaaatatgtcgtaatattattgggtccagcagttgct
gctgaaaattcttcagaggtagttgcaatttgggcagatcatgcaggattagcaggattt
gcacgtcaatatttcgaatatttattaaaagattcaaagaaggtgtaa
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