Candidatus Nitrosopumilus koreensis: NKOR_00550
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Entry
NKOR_00550 CDS
T02304
Name
(GenBank) aIF-2BI family translation initiation factor
KO
K08963
methylthioribose-1-phosphate isomerase [EC:
5.3.1.23
]
Organism
nkr
Candidatus Nitrosopumilus koreensis
Pathway
nkr00270
Cysteine and methionine metabolism
nkr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
NKOR_00550
Enzymes [BR:
nkr01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.23 S-methyl-5-thioribose-1-phosphate isomerase
NKOR_00550
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Gene cluster
GFIT
Motif
Pfam:
IF-2B
Serine_rich
RRM_1
DUF6506
Motif
Other DBs
NCBI-ProteinID:
AFS80030
UniProt:
K0B548
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Position
107688..108734
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AA seq
348 aa
AA seq
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MSSDPSSLRTVDWKNNKVVMIDQTKLPNELVFVEFDDYNQVADAIRTLVVRGAPAIGVSG
AFGLALAVLQSNATTKDELISDLENAKKILFETRPTAVNLAWGLEKIMIVAKSRDSVEQI
REQVISEAKKMADEDIEINKTMGKNGSILFDDNDTIMTHCNAGALATVAYGTALGVIRAT
KESGKNVKVIATETRPIQQGSRLTAFELKHDGFDVSLIPDTAVGYSMANGLVNKVIVGAD
RIVKTGHVFNKIGTYQVATMAKQHGIPFYVAAPLSTIDMESNAEDVIIEMRKGSEVTGIG
DKKTAPDKINVINPAFDMTPPELISGIITEKGIAKPPYEESIKKLFEN
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgatccttcttcattacgaaccgtagattggaaaaataataaagttgtaatg
attgatcaaaccaaattacctaatgaacttgtttttgtagaatttgatgactataatcag
gttgctgatgcaattagaactcttgtggtacgtggcgctcctgcaattggagtatctggt
gcttttggtttggcattggcagtattacaaagtaacgcaaccacaaaagatgaattaatt
tcagatttagaaaatgcaaaaaaaattctttttgaaactagacctactgcagtaaatttg
gcttggggtttagaaaaaattatgattgttgcaaaatcgagagattcagttgaacaaatt
agggaacaagtcatatctgaagcaaaaaaaatggcagatgaagatattgaaattaataaa
actatgggaaaaaatggttctattctttttgatgataatgataccataatgactcattgt
aatgctggtgccttagcaactgttgcatatggtactgcattaggtgttatacgtgcaaca
aaagaaagcggtaaaaatgtcaaagtcatagctactgaaacaagacctatccaacaaggt
tcacgattaactgcattcgaattaaaacatgatggatttgatgttagtttgattccagat
actgctgttggttatagtatggcaaatggcctagtaaataaagtcatagttggtgcagat
agaattgtaaaaacaggtcatgtctttaacaaaattggaacctatcaagtagcgacaatg
gcaaaacaacatggaatcccattttatgttgcagcgccattatcaacaattgatatggaa
agtaacgcagaagatgtcataattgaaatgaggaaaggaagtgaggtgactggaattggt
gataaaaaaactgctcctgataagattaatgtgatcaatcctgcatttgacatgactcct
cctgaattgatctctggaataattactgaaaaaggcatagcaaaaccaccatatgaagaa
tccattaaaaaattatttgaaaattaa
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