Candidatus Nitrosopumilus koreensis: NKOR_01135
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Entry
NKOR_01135 CDS
T02304
Name
(GenBank) succinate dehydrogenase or fumarate reductase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
nkr
Candidatus Nitrosopumilus koreensis
Pathway
nkr00020
Citrate cycle (TCA cycle)
nkr00190
Oxidative phosphorylation
nkr00650
Butanoate metabolism
nkr00720
Other carbon fixation pathways
nkr01100
Metabolic pathways
nkr01110
Biosynthesis of secondary metabolites
nkr01120
Microbial metabolism in diverse environments
nkr01200
Carbon metabolism
Module
nkr_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NKOR_01135
00650 Butanoate metabolism
NKOR_01135
09102 Energy metabolism
00190 Oxidative phosphorylation
NKOR_01135
00720 Other carbon fixation pathways
NKOR_01135
Enzymes [BR:
nkr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NKOR_01135
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
Thi4
FAD_oxidored
GIDA
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AFS80137
UniProt:
K0B4T0
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All DBs
Position
193084..194796
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AA seq
570 aa
AA seq
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MVDSIEFDLIICGSGLAGLRAAIAAAKKGPNLKIGIVSKLQVMRSHSVSAEGGTAAVIQE
DAGDTIESHVYDTVKGSDFLADQDVAERLCVEMPKEIHQLEHWGMPWSRKEDGRIDQRNF
GGYSFPRATYASDKVGFFEMQTLYDTCQKFENIEYLNEWFATSIIHDGKKFMGLTAIELG
SGTFYTIKGKALIIATGGAGRLYSFSTYALSSTPDGLDMGLRAGMALKDMEFVQFHPTGI
LPSGILITEGARGEGGYLLNNKGERFMKTYAAGKMELAPRDIVSRSIITEIQEGRGFKHE
TGVDCMKLDLRHIGDEKIKEKLGGIREISIKFSGIDPAQELLDIRPVCHYMMGGLHTDID
GATEIQGVWAAGEAACNSVHGSNRLGANSTSECIVWGKITGELAADYAMKNTTADQWPHH
LVAAEEKRIYDGIFRGNGDTNPYEIRQELTDTMNEKAYVYRNETDLVAGLKRIRELKAQT
WKHVDDKAKEYNTNFSNVMELDSMFRVAEIVLLGAINRKESRGAHARTDYTKRDDANFLH
HTLAYYDPNEPIMKTYPVTITKYQPVERKY
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggtcgattcaatcgagtttgatttgataatttgtggttctggattagctggccttaga
gcagcaattgcagctgcaaaaaaaggaccgaatctgaaaatcggaattgtttcaaaattg
caggtaatgcgatctcattctgtttctgcagaaggtggaactgctgcagtcattcaagaa
gatgccggagatacaattgaatctcatgtttatgataccgtaaaaggtagtgattttctt
gcagaccaagatgttgcagaaagactctgtgttgaaatgccaaaagaaattcatcaatta
gagcattggggtatgccttggtctagaaaagaagatgggagaattgatcaacgtaatttt
ggtggttatagttttcctagagcgacttatgcatcagacaaagttggtttctttgaaatg
caaacattgtatgatacatgtcaaaaatttgaaaatattgaatatcttaacgaatggttt
gcaacatctataattcatgatggaaaaaaattcatgggtcttactgcaattgaattaggt
tcgggaacattttacacaattaagggaaaagccctcattatcgcaactggcggtgctgga
aggctgtatagtttttcaacatatgcattatcttcaactcctgatggtttggatatgggc
ttacgtgctggtatggcactcaaagatatggaatttgtacaatttcatccaacaggaatt
ttaccctctggtattttgattactgaaggtgcaagaggtgaaggcggttatctacttaac
aacaaaggcgaacgttttatgaaaacttatgctgctggaaaaatggaattagctccacgt
gacattgtatcaagatcaattataactgagattcaagaaggtcgtggtttcaaacatgaa
acaggagttgattgtatgaaacttgatttgcgacatattggagatgaaaagattaaagaa
aagttaggtggaatcagagaaatttcaatcaagttttctggaattgatcctgctcaagaa
ttacttgacattagacctgtttgtcattacatgatgggtggacttcatactgatattgat
ggtgcaacagaaatccaaggtgtttgggcagcaggtgaagccgcatgtaatagcgttcat
ggttcaaacagattaggtgcaaactctacctctgaatgtattgtttggggtaaaattacg
ggcgaacttgcggcagattatgctatgaaaaacaccactgcagatcaatggcctcatcat
ttagttgcagcagaagaaaagagaatctatgatggaatatttcgaggaaatggtgatact
aatccatatgaaattagacaagaattaactgatactatgaatgagaaagcatatgtttac
agaaacgaaactgatcttgttgcaggtcttaagagaattagagaactaaaagcacaaact
tggaaacatgtagatgataaagcaaaagagtataacaccaatttttcaaatgtgatggaa
ttagattctatgtttagagtagctgaaattgttttgcttggtgcaattaatagaaaagaa
tcacgtggtgcccatgcaagaactgattatactaaaagagatgatgcaaactttttacat
cacacacttgcttactatgatccaaacgaaccaattatgaagacatatccagtaacaatc
actaagtatcagcctgtggagaggaagtattaa
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