Candidatus Nitrosopumilus koreensis: NKOR_01895
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Entry
NKOR_01895 CDS
T02304
Name
(GenBank) NusG antitermination factor
KO
K15172
transcription elongation factor SPT5
Organism
nkr
Candidatus Nitrosopumilus koreensis
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
NKOR_01895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nkr03021
]
NKOR_01895
03019 Messenger RNA biogenesis [BR:
nkr03019
]
NKOR_01895
Transcription machinery [BR:
nkr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
NKOR_01895
RNA polymerase I system
NKOR_01895
Messenger RNA biogenesis [BR:
nkr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
NKOR_01895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW4_SPT5
NAGLU_N
KOW5_SPT5
Fibroin_P25
Motif
Other DBs
NCBI-ProteinID:
AFS80285
UniProt:
K0B5Q9
LinkDB
All DBs
Position
complement(335915..336373)
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AA seq
152 aa
AA seq
DB search
MSEEVKSHLFAIRTTGGQEKVVMRLLEAKANANQINIQSVFWVSDLKGYVVIEAINPSDA
YMAVEGVRHIRGQLRGELEFKDIEGYLVKKSTVSTLAVDNVVEITGGPFKGMKATITRID
PEKEEATVVLLDASYQLPVTVDANYLKLSTEG
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgaggaagtaaaatcacatttgtttgcaattagaaccactggtggacaagaaaaa
gtggtaatgagattattagaagcaaaagctaatgctaatcaaataaacattcaatcagtg
ttttgggtaagtgatcttaagggatatgtcgtaattgaagcaataaacccaagtgatgca
tacatggcagtggaaggtgtaagacacatccgtggccaattaagaggagaattagaattc
aaagatattgaaggatacttggtaaagaaatcaacagtatcaacacttgcagtagataat
gtagtagaaatcactgggggtccattcaagggaatgaaggcaacaattacaagaatagat
ccagaaaaagaagaagctacagtagtattgcttgatgcatcataccaattaccagtaaca
gtggatgcaaactatctaaaactatcaactgagggttag
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