Candidatus Nitrosopumilus koreensis: NKOR_02240
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Entry
NKOR_02240 CDS
T02304
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
nkr
Candidatus Nitrosopumilus koreensis
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nkr03016
]
NKOR_02240
Enzymes [BR:
nkr01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
NKOR_02240
Transfer RNA biogenesis [BR:
nkr03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
NKOR_02240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
AFS80348
UniProt:
K0B2U0
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All DBs
Position
385130..385693
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AA seq
187 aa
AA seq
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MEETLLVKGTLVSDQACVSDKNMIHDLELKGYGETEKEKLFLKQFETLYLLYTNKLILKK
GKKQIDFNFFMNACQENDSKILTKFLIYRDLRNRGYVVKDGFGFGSDFRVYERGHFGEKG
AKFLIFGLNEGQQEKMGSLQKKIQEITQMGKEPIIAVIERRGEVIYYKINKMNFYENKTR
LEESFNF
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaacccttttggtaaaaggcacattagtctcagatcaggcatgtgtttctgat
aagaatatgattcatgaccttgagctaaaagggtacggagaaactgaaaaagaaaaatta
tttctaaaacaattcgaaacgttgtatctactatacacaaacaaactcattctaaagaaa
ggcaaaaagcaaattgattttaatttttttatgaatgcttgccaagaaaatgattctaaa
attcttaccaagtttttgatttaccgtgatctcagaaatcgaggatatgttgtaaaagac
gggtttggatttggatctgatttcagggtatatgaaaggggacattttggtgaaaagggg
gcaaaatttttgatatttggtcttaatgaaggacaacaagaaaagatgggcagtttgcaa
aaaaagattcaagaaattacccaaatgggaaaagagccaatcattgcggtaattgagaga
cgcggtgaagtgatctattacaaaataaacaaaatgaatttttatgaaaataaaacaaga
cttgaagagtcttttaatttctaa
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