Candidatus Nitrosopumilus koreensis: NKOR_02670
Help
Entry
NKOR_02670 CDS
T02304
Name
(GenBank) zinc finger TFIIB-type domain-containing protein
KO
K03124
transcription initiation factor TFIIB
Organism
nkr
Candidatus Nitrosopumilus koreensis
Pathway
nkr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NKOR_02670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nkr03021
]
NKOR_02670
Transcription machinery [BR:
nkr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NKOR_02670
Prokaryotic type
Archaeal type
TFB
NKOR_02670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RPA_interact_C
Trm112p
Zn_ribbon_LysW
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-ProteinID:
AFS80428
UniProt:
K0B332
LinkDB
All DBs
Position
complement(463202..464158)
Genome browser
AA seq
318 aa
AA seq
DB search
MNILEKQNCPECQATVVNDMQNGEIICSGCGVVVADQVADYGPETISSNLEDKMKLARAT
GQTTYSQHDLGITTEIAISTKDFSGKTINHEVANQMHNLRKWQQRVRVSSPKERRLANVL
TKMGETCDGLGLSKNVLETASMIYRNLDGHVDVKGKSVVSITAATIYMACKQCDVVRSLE
EIIRGICPAKDVKSKTKLAARYYRTMVMEMGQIAAPVVTMDKYISKIANMTQTEVRVERL
ALEIAEKTKDSSIADGKAPNGIAAAYLYVSSVLLGQNVLQRDVSGIAGVTEVTIRNRCKE
ILTSYKLKITLRPSLAKY
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaacatactagaaaaacaaaactgtcctgaatgtcaagcaacagtagttaatgacatg
cagaacggagaaataatttgctcgggctgtggcgtagtagttgcagatcaagtggcagat
tatggtccagaaacaataagttcgaatctcgaagacaaaatgaagttagcaagagcaacc
ggacaaacaacttattcccaacacgatttgggaatcacaactgagatagcaattagcaca
aaggactttagtggaaaaacaatcaatcacgaagttgcaaaccaaatgcacaatctcaga
aagtggcaacaaagagtaagagtatcctcaccaaaagagagacgacttgcaaatgtttta
acaaaaatgggtgaaacatgtgacgggttaggtctttcaaaaaatgtgttggagactgct
tctatgatatacagaaacttggatggacatgttgatgtgaagggaaaatcagtagtaagc
attacagctgctacaatttacatggcatgcaaacaatgtgatgtagtaagatcgctagaa
gaaattattcgaggaatatgtccagcaaaagatgtaaaatcaaaaacaaaacttgcagca
agatactatagaaccatggtaatggaaatgggacaaatagctgccccagtagtaaccatg
gacaaatacatctcaaagatagcaaacatgacacaaactgaggtcagagtcgaaagatta
gccttagaaattgcagaaaaaactaaagatagcagtattgcagatggaaaagctccaaat
ggaattgctgcagcatatctgtatgtgtcatcagtactgctagggcaaaacgtactccaa
agagacgtttcaggtattgcaggagtaactgaagttactatcagaaatagatgtaaagag
attctaacaagctacaaactcaaaataacattgagaccatctctggccaaatattaa
DBGET
integrated database retrieval system
