KEGG   Candidatus Nitrosopumilus koreensis: NKOR_02745
Entry
NKOR_02745        CDS       T02304                                 
Name
(GenBank) GTP-binding signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
nkr  Candidatus Nitrosopumilus koreensis
Pathway
nkr02024  Quorum sensing
nkr03060  Protein export
nkr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nkr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    NKOR_02745
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NKOR_02745
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NKOR_02745
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nkr02044]
    NKOR_02745
Enzymes [BR:nkr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     NKOR_02745
Secretion system [BR:nkr02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   NKOR_02745
  Eukaryotic Sec-SRP protein
   NKOR_02745
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N MeaB CbiA AAA_22 nSTAND3 ParA MobB APS_kinase AAA_17 cobW KTI12 AAA_31 Zeta_toxin AAA_18 AAA PduV-EutP 6PF2K MMR_HSR1 MipZ AAA_16 AAA_30 NTPase_1 AAA_5 IstB_IS21 ABC_tran Thymidylate_kin AAA_33 AAA_24 LpxK TssR_C Fer4_NifH ATP_bind_1 G-alpha NPHP3_N Arf ResIII CLP1_P SRPRB AAA_28 SpoVIF VirC1 AAA_2 LytR_C NACHT AAA_25
Other DBs
NCBI-ProteinID: AFS80443
UniProt: K0B341
LinkDB
Position
472440..473765
AA seq 441 aa
MLDGLKSSLGDAIKKIVKSSGIDEELIKELSKDVQRALLQSDVNVRLVLEITKHLEERAL
NETPPPGLSRKDHIVKILYDELSSLLGNESEFDFKPGKQNKIILLGIQGSGKTTVASKLA
KFLTRQGYKVGVIGADTYRPGALVQLKTMCEKSNVEVYGEENNKDSPSIVKNGLKHYEGQ
PLDVILIDTAGRHKEEQDLLEEMDRINKIADPDLALLVIDGTIGQQCFNQAEAFHKTIPV
GGVIITKLDSSAKGGGALAASAATGAQIMYIGTGERIDDLEKFSPTRFVGRLLGMGDVQA
VLDLAKRLENEGDDVRMKRISSGKMNMDDFFYQLEEVTKVGSLQGLLESMPGLSGMVKGD
QVNQMEDRVSKWRYIIQSMTKEEKADPDLLNSSRIKRIARGSGWPEGEVKELIKNYKNSK
NMMKASKGRQMQGTLRRMGLG
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgcttgacggacttaagagtagtttaggcgatgcaatcaaaaagattgtcaaatcatcg
ggaattgatgaagaacttatcaaggaactatctaaggatgttcaaagggcattattgcaa
tctgatgttaatgtgaggttagttcttgaaattacaaagcatttggaggagcgtgcccta
aatgaaacccctcctccaggcctttctaggaaggaccatattgtaaaaatcctatatgat
gaactctcaagcttacttggaaatgaatctgaatttgatttcaagcctggaaaacaaaat
aaaatcattttgttgggaattcaaggaagtggaaaaaccactgttgcctccaaacttgca
aaattcttgactagacagggatacaaagttggggttattggagctgatacctatagaccg
ggagctttagtgcaactcaaaacaatgtgtgaaaaatcaaatgttgaggtatatggagaa
gaaaataacaaagactctcctagcattgtgaaaaatggtttgaaacactatgaaggacaa
ccattagatgtcatcctaattgatactgcaggacgccataaagaagaacaagatctactt
gaagaaatggatagaattaacaaaattgctgaccctgatttggcgctacttgtaattgat
ggaacaattggacaacaatgtttcaatcaagctgaggcatttcacaaaacaatacctgtt
ggtggtgttataatcacaaaattagatagttccgcaaagggaggaggtgcattagctgca
tctgctgcaactggtgcgcaaataatgtacattggtactggtgaacgaattgatgattta
gaaaaattctcaccaacaagatttgttggacgtctattgggaatgggtgatgttcaagct
gttttagatttggcaaaacgtttggaaaatgaaggtgatgatgttcgaatgaagagaatc
tctagtggaaaaatgaatatggatgatttcttttatcaattagaggaagtaactaaagtt
ggttcacttcaaggattacttgaaagtatgcctggtctttctggaatggtaaaaggtgat
caagtaaatcaaatggaagacagagtttcaaaatggcgctacatcattcaaagtatgacc
aaagaagagaaggcagatcctgatttactaaactcttctagaatcaaaagaattgcacga
ggttcaggttggccagaaggtgaagtcaaagaactaattaaaaattataaaaattctaag
aatatgatgaaggcttcaaaaggaagacaaatgcaaggcactcttagaagaatgggatta
ggttaa

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