Candidatus Nitrosopumilus koreensis: NKOR_03310
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Entry
NKOR_03310 CDS
T02304
Name
(GenBank) transcription factor TFIIB cyclin-related protein
KO
K03124
transcription initiation factor TFIIB
Organism
nkr
Candidatus Nitrosopumilus koreensis
Pathway
nkr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NKOR_03310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nkr03021
]
NKOR_03310
Transcription machinery [BR:
nkr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NKOR_03310
Prokaryotic type
Archaeal type
TFB
NKOR_03310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AFS80556
UniProt:
K0B7X0
LinkDB
All DBs
Position
complement(565903..566796)
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AA seq
297 aa
AA seq
DB search
MLQKYQIHNCSNSKLITDTFNGEIFCANCGTVIEEKLDNHNETPVHSLEDFMSKSQVGSK
QSLSIHDKGMSSIIGKDKDAKGKSLSSSNKSRFNRLRVLDSRSKARKSSERTLVKSLTFL
NGLKGKLGISENTIEGTSSLFRRAQKHQLIRGRSSDDLMAAALYVSCRQTMTPRSLEDIS
EIANITKKHLQKSVRVLINEFGLVLPQYNISSFLTKLSNDLGFSEKTKRYALKILSDVEK
CGSAAGKNPIGQAAASLYLASMLMGENISQSTFSKISGISTVTLRNRKNTIQKLLEL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttacaaaagtaccaaattcataattgcagtaatagtaaattaatcacagacacattt
aatggagagattttttgtgcaaattgtggcacagttatcgaagaaaaattagataatcat
aatgaaacacccgttcatagtttagaggatttcatgagtaagagtcaagttggttcaaag
caatccctttcaatacatgacaaaggaatgtcatctatcattggaaaagataaagatgct
aaaggtaaatcattaagctcatctaacaaatcaagatttaatcgactaagagtattagat
agtagaagcaaagcaagaaaatcatcagaaagaactcttgtaaaatctctaacttttcta
aacggattaaaaggaaagttaggcatttctgagaatacaatagaaggtacatcgtcacta
tttagaagggcacaaaaacatcaattgatccgaggaagaagttctgatgatttgatggca
gcagctttgtatgtttcatgtagacaaactatgacccctagaagtctggaggatatttct
gaaattgccaacattacaaagaaacatctacaaaaatcagtcagagttttaattaatgaa
tttggacttgtattgcctcaatacaatatctcctcatttctgactaaattatccaatgat
ctaggattttctgagaaaaccaaacgttatgctttgaagatattatcagatgttgaaaaa
tgtggttctgctgctggaaagaatcctattggacaggctgccgcatcactatatctggca
tccatgctgatgggagaaaatatatcacagagtacattctcaaaaatttctggaatatca
actgtaacattacgtaatagaaaaaatacaatacaaaaattattggaattatga
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