Candidatus Nitrosopumilus koreensis: NKOR_03385
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Entry
NKOR_03385 CDS
T02304
Name
(GenBank) oligopeptide/dipeptide ABC transporter ATPase
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
nkr
Candidatus Nitrosopumilus koreensis
Pathway
nkr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NKOR_03385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nkr02000
]
NKOR_03385
Transporters [BR:
nkr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NKOR_03385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_16
SMC_N
AAA_22
AAA_29
AAA_7
Zeta_toxin
RsgA_GTPase
nSTAND3
AAA
TsaE
AAA_15
Sigma54_activat
NPHP3_N
AAA_23
AAA_25
RNA_helicase
AAA_5
KAP_NTPase
Sigma54_activ_2
AAA_18
NACHT
Motif
Other DBs
NCBI-ProteinID:
AFS80571
UniProt:
K0B7Y5
LinkDB
All DBs
Position
complement(580984..581949)
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AA seq
321 aa
AA seq
DB search
MSEILRIEHLKKYFIKKGMFGKQSDTVRATDDISFSVERGEVFVLAGESGSGKSTIAKLI
LRSIEPDSGKIFFENKEIDNQPENLQKIRMGCQMIHQDPYDSINPRMKIGDIVSEPLEIH
NVGNKDERKKRVIEVLQEVKLEPAEDIIRKYPHMLSGGQRQRVVLARALSLKPKIILADE
PVSMLDVSIRAEMLELMHELQKKYSISFIYITHDLATARYFGQRIGILYLGKIVEMGPID
EVLLSPKHPYTQALIDAISEPNPDNLHREKKIRINEPSNIDILQGCRFRNRCPYIIEKCK
VEPDLELIDNGHYSACHVKID
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgagattctcagaatagaacatttgaaaaaatatttcatcaagaaaggaatgttt
ggaaaacaatcagacacagtaagagcaacagatgatatttctttttctgtagaaagagga
gaagtctttgttttagcaggagagtcaggttcaggaaaatcaactattgcaaaactgatt
ttaagatcaatagaaccagattctggaaaaatattttttgaaaataaagagatagacaac
caacctgaaaatttgcaaaaaatcagaatgggctgtcaaatgatacatcaagacccgtat
gattccatcaacccaagaatgaaaattggggacattgtttcagagcccctagaaatacac
aatgtcgggaataaagatgaaagaaagaaaagagtaatcgaagtcttgcaagaggtaaaa
ctagaacccgcagaagatatcatcagaaaatacccccatatgctatcaggaggtcagagg
caaagagttgttctggccagagcattatcattaaaaccaaaaatcattttagcagatgag
ccagtttccatgttagatgtctcaatcagagcagaaatgcttgaactaatgcacgagtta
caaaaaaagtacagtatttcatttatctatatcacacatgacttggcaacagctaggtat
tttggtcaaaggataggaattttgtatttaggaaagattgtagagatgggaccaattgac
gaggttttacttagtccaaagcacccatacacacaggcactaattgatgcaatatctgag
ccaaaccctgacaacctacacagagaaaagaaaatcaggataaatgagccatcaaacata
gacattcttcagggatgtagatttagaaatcgatgtccatacatcatagaaaaatgcaaa
gtagagccggacctagaactaattgataatggacattattcagcttgtcatgtcaaaata
gattaa
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