Candidatus Nitrosopumilus koreensis: NKOR_03680
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Entry
NKOR_03680 CDS
T02304
Name
(GenBank) binding-protein-dependent transporter inner membrane component
KO
K02034
peptide/nickel transport system permease protein
Organism
nkr
Candidatus Nitrosopumilus koreensis
Pathway
nkr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NKOR_03680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nkr02000
]
NKOR_03680
Transporters [BR:
nkr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NKOR_03680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
VtrA_C
DUF5904
Motif
Other DBs
NCBI-ProteinID:
AFS80630
UniProt:
K0B6P3
LinkDB
All DBs
Position
complement(628773..630140)
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AA seq
455 aa
AA seq
DB search
MSSITPQEIKEEFLRSKIGIAGISILIILVATSIIAIIAIPVETFQEWNNPGNWILYPKV
AIPVWVNIFMTEKIPEHKILETPTIQTNSQGEIMLSSHKFGVNFDYKSFPNDFIYVFSSE
YSESVLLKMSVTRPDGIKLELLSTSLPYSDTKTIHSERIFSTDSAIKKNLVLQSENFDFD
LDGLSAEDIVFSKTNTNEPLKGNYIFSVDTYSVNSEIKTHESKLIIGGKAFGMMGTDELR
RDLTIGLLWGTPLALFIGLVVSIASVIMGLLYGVYAGFKGKKTDEVMMRFNDVIYALPAL
PFLIILSVTISNSIFVLVGFLMIFGWVGIAKVARSMSLQIKTRGYVDAANMMGQKNSKIV
FKHILPQLLPYAFASIAISVPAAITTEAGLSFLGLGDPSFPTWGHILHDANTFGAAARGL
WWWIMPPGIMIAIAGLAFVFIGNALDAIVNPKLKR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtatcaccccacaagaaatcaaagaagagtttcttagaagcaaaataggaatt
gccggaatttctattctaatcattcttgttgcaacatcaattattgcaataattgccatt
ccagtagagacatttcaagaatggaacaatccaggaaactggatactgtatccaaaagtt
gcaattcctgtttgggtaaatatcttcatgactgaaaaaattccagaacacaaaattctt
gaaacaccaacaattcaaacaaactcacaaggcgagatcatgttatcatcgcacaagttt
ggagtaaattttgactacaagtcttttccaaatgactttatctatgttttctcatcagag
tattctgaatcagtattattgaaaatgtcagtgactagaccagatggaattaaactagaa
ttactatcaacgtcattaccgtattcagatacaaaaacaattcacagtgaaagaattttt
tcaacggatagtgcaataaagaagaatttagtattgcaatcagagaattttgattttgat
ttagatggattgtcagctgaagacattgtattttcaaaaacaaatacaaatgaaccactc
aaaggaaactatattttctcagtggacacatattctgtcaactctgagattaaaactcat
gaatcaaaattaatcatcggtggaaaggcatttggaatgatgggtactgatgaattaaga
cgagaccttacaataggattgttatggggaacacctcttgcattattcatcggtttagta
gtatctattgcatcagtgataatgggtttgctgtatggagtctatgcgggattcaagggt
aaaaaaacagatgaagtcatgatgcgttttaatgacgtaatctatgcattaccagcactt
ccgtttcttattattttgtcagtcacaatcagcaatagcatatttgtgctagttggattt
ttaatgatttttggatgggtaggcattgcaaaagttgcaagaagcatgtctttgcagatt
aaaaccagaggatatgttgatgcagccaacatgatgggacaaaaaaactccaaaatagta
ttcaaacatatcttgccccaattacttccgtatgcgtttgccagtatcgcaatatcagtg
ccagctgcaatcaccacagaagctggccttagtttcctaggattgggagacccatcattt
ccaacgtggggacatattcttcatgatgcaaatacgtttggcgcagcagcaagagggttg
tggtggtggattatgccaccaggaataatgattgcaatagcagggctggcatttgtcttt
ataggaaatgcactagatgcaattgtcaacccgaaattaaaaagataa
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