Candidatus Nitrosopumilus koreensis: NKOR_04025
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Entry
NKOR_04025 CDS
T02304
Name
(GenBank) ATPase AAA
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nkr
Candidatus Nitrosopumilus koreensis
Pathway
nkr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
NKOR_04025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nkr03019
]
NKOR_04025
03009 Ribosome biogenesis [BR:
nkr03009
]
NKOR_04025
04131 Membrane trafficking [BR:
nkr04131
]
NKOR_04025
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nkr04147
]
NKOR_04025
Messenger RNA biogenesis [BR:
nkr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
NKOR_04025
Ribosome biogenesis [BR:
nkr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
NKOR_04025
Membrane trafficking [BR:
nkr04131
]
SNARE
SNARE associated proteins
Others
NKOR_04025
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NKOR_04025
Exosome [BR:
nkr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NKOR_04025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_5
CDC48_2
TIP49
AAA_14
AAA_22
AAA_lid_PRS2_C
nSTAND3
Mg_chelatase
AAA_33
AAA_7
RNA_helicase
IstB_IS21
NPHP3_N
AAA_24
Sigma54_activat
AAA_28
Parvo_NS1
Zeta_toxin
DUF815
ABC_tran
AAA_3
AAA_17
DUF5906
PhoH
AAA_18
AAA_30
AAA_11
SLFN-g3_helicase
AAA_19
Vps4_C
ATPase
Zw10_N
Motif
Other DBs
NCBI-ProteinID:
AFS80695
UniProt:
K0B6T9
LinkDB
All DBs
Position
677124..679259
Genome browser
AA seq
711 aa
AA seq
DB search
MYSKQFLSEIELKIEEMPQAYVGKGVAIVDPKIIEENNWKSGQILELSANKKSHVKLWSG
FPEDYDSNVIRIDGLTRYNIGASIGENLSLKAVDGEEAEQIVLSPIEKIHAEGLHEYMSS
LYQGHIFTTGDTVIVNTQMGSKIQLVVTSTKPAKPVFVTEDTIFKLGNITKLDDPSIPRI
TYDELGGLKNEILKIREMVELPMRHPELFEKIGISSPKGVLLYGPPGTGKTLLAKAVAGE
TNSHFTSLSGPEIMAKHYGESEEKLREIFTQAEENAPSIIFIDEIDSIAPKREEVSGELE
KRIVSQLLTLMDGMKSRGKVVVIAATNRPDSIDPALRRPGRFDREIEIGIPDEDGRLEVL
NIHTRGMPLDKKVDLKKISKTTHGFVGADLEVLCKEAAMRSLRRILPEINLEEEKVSKEV
LQKIKITSKDFTDALKEVRPSALREVLVQIPNVSWDDVGGLDKLKEELREAIEWPLKYKD
AFDYAHVKTPKGVLLYGPPGTGKTLIAKAVATTTESNFISIKGPELLSKWVGESEKGVRE
IFRKARMAAPCIIFFDEIDALVPKRGSGGSDSHVTENVVSQILTEIDGLEELNNVLIIGA
TNRLDIVDPALLRPGRFDRVIEVPNPDVAGIEMILKIHTKDKPLAEDVNLKTLAEMSKGF
SGAEIEEVCNRGALLGVKRFVENKDKDVKSIKITQKDLEYSINEINKTKKI
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgtacagtaaacaattcctgtcagaaattgaactgaaaatcgaagagatgccacaggcc
tatgtgggtaagggagtggccatcgttgatccaaaaataattgaagagaataactggaaa
tcgggacagattctagaactgtctgcaaataaaaaaagtcatgtaaaactatggtctgga
tttccagaagactatgacagcaatgttatccgcatagatggtttgactagatacaacatc
ggcgcaagtatcggggagaatctttctctcaaagcagttgatggggaagaagcagaacaa
attgtgttatcccccattgaaaagattcatgccgagggattgcatgagtacatgtcttca
ctttatcaaggccatatctttaccacaggcgatacagtgatagtcaatacccagatggga
agtaagattcagcttgttgtgaccagcacaaaacctgcaaagcctgtttttgtaaccgag
gatacaatattcaagttaggaaacattacaaaattagatgatccttccataccaagaatt
acctatgacgagttgggcggactaaaaaatgagattctaaagatacgtgaaatggtagag
ttaccgatgaggcatccagaattgtttgagaaaatcggcatatcctcacccaaaggtgtt
ttgttgtatggtcctcccggaactggaaagacgttacttgcgaaggcagttgcaggtgag
acaaattcccactttacatcacttagtggtccggaaatcatggcaaagcattatggtgaa
agcgaggaaaaactgcgagaaatttttacacaagctgaggaaaatgcccctagcattatc
ttcattgatgaaattgattcaattgctccaaaaagagaggaggtttcaggagaattggaa
aaacgcattgtatcacaattactgacattgatggatggaatgaaatctcgtggaaaagtt
gtagttattgctgcaaccaatagaccagatagcatagatcctgcacttcgaagaccaggc
agatttgacagggaaattgaaatcggaattcctgatgaagatggaagattagaagtgtta
aacatccacacacgtggaatgcctttggacaaaaaggtagatctaaagaaaatttctaaa
acaactcacggatttgtgggggctgacctggaagttctttgtaaggaggcagcaatgaga
tcccttagaagaattttacctgagattaatttggaagaagaaaaagtttcaaaggaagtg
ctgcaaaaaataaagataactagcaaggattttacagatgcattaaaagaagtcaggcct
tctgcactaagggaagttctagttcagattccaaatgtaagttgggatgatgtaggtgga
ttggacaaactaaaggaagaactgcgtgaggcaatagagtggccattaaaatacaaagat
gcttttgattatgcacatgtaaaaacgccaaaaggggtgctgctttacggtcctccggga
acaggaaaaacactaattgcaaaggcagttgcgacaacaactgaatccaattttatcagc
atcaagggtcctgaactgctatccaaatgggttggtgaatctgaaaagggggtaagagag
attttcagaaaagcacgtatggctgccccctgtataattttctttgatgaaatagatgca
cttgttccaaaaagaggaagtggtggttcagattcacatgtcacagaaaatgttgtctcc
cagattctaactgagatagatgggttggaggaactcaataacgtattgataattggtgca
acaaacaggctggacattgtggatccagcactactcaggcctggcagatttgacagggta
atagaagttccaaaccctgatgttgcaggaatagaaatgattctcaagattcacaccaaa
gacaaaccacttgctgaagatgtcaatctaaagaccttagcagaaatgtcaaagggattc
agtggagcagaaatcgaagaggtgtgcaatcgcggagcactcttgggagttaagagattt
gtggaaaacaaggacaaagacgtaaagtccatcaaaataactcaaaaggatctagaatac
tcgataaacgaaataaataagacaaaaaagatttga
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