Candidatus Nitrosopumilus koreensis: NKOR_04880
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Entry
NKOR_04880 CDS
T02304
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01895
acetyl-CoA synthetase [EC:
6.2.1.1
]
Organism
nkr
Candidatus Nitrosopumilus koreensis
Pathway
nkr00010
Glycolysis / Gluconeogenesis
nkr00620
Pyruvate metabolism
nkr00630
Glyoxylate and dicarboxylate metabolism
nkr00640
Propanoate metabolism
nkr00680
Methane metabolism
nkr00720
Other carbon fixation pathways
nkr01100
Metabolic pathways
nkr01110
Biosynthesis of secondary metabolites
nkr01120
Microbial metabolism in diverse environments
nkr01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NKOR_04880
00620 Pyruvate metabolism
NKOR_04880
00630 Glyoxylate and dicarboxylate metabolism
NKOR_04880
00640 Propanoate metabolism
NKOR_04880
09102 Energy metabolism
00720 Other carbon fixation pathways
NKOR_04880
00680 Methane metabolism
NKOR_04880
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nkr01004
]
NKOR_04880
Enzymes [BR:
nkr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.1 acetate---CoA ligase
NKOR_04880
Lipid biosynthesis proteins [BR:
nkr01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
NKOR_04880
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
ACAS_N
Motif
Other DBs
NCBI-ProteinID:
AFS80862
UniProt:
K0B6X7
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All DBs
Position
complement(809512..811437)
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AA seq
641 aa
AA seq
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MSDFEFIPTQKQVEESNIFHFMQKHGISSLTELSNKAKNELEWFWSEVDKDIGVVWDSPY
EKILDSSKGIAHSKWFVNGKTNIYKSTVEKFAKTTPNKIAYYFISEDEATSELSYLQLDE
KVSKLANGLKSLGVGRGDVVAIYLPMIEEAILAILASAKIGAIQTVIFSGYSTESLHVRL
QDCNAKILFVSDGFVRKGKPISQKEPMENAILQTKVEKTIVVNYKGIDKYEKSENIVFYD
ELTESQDSVCHTEVMDSEDSLFILYTSGTTGKPKGVVHVHGGFSVFAGHQAAYLIDLQAQ
DVLFWPADIGWITGLVWNVYGLLIMGASSVIYDGALDFPSSDRVWKILSNYNATIFGISP
TATRLFKKNNEEPLKNFSLDKIKNIPTTGEPLDEDSWWWLFEKVGNKKIPIMNLSGGTEI
GGAMLSVFPGMKLKPSTVGIPVPGIDLDVVDDDGNSVKNKNGYLIIRSPWPGMTRGLLND
NKRFLETYWSRFENIWFHGDYVFVDNDNLWYMRGRTDDVINVSGHRMSTAEIEHTVMSHE
KISDAASVAIPDDLTGEAIVVFFVTDNKNDFGLESEVSDFISEKIGKLAKPKFVFQLSDL
PKTRTGKIMRRLLKSKLLGNDLGDLSSLENPQILDEVSKLG
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgattttgaattcataccaacacaaaaacaagttgaagaatctaacatctttcat
tttatgcagaaacatggaatttcatcattaactgaactgtcaaataaagcaaaaaatgaa
ttggaatggttttggagtgaagttgataaggatattggggttgtttgggattctccatat
gagaaaatacttgattcttcaaaaggaatcgcacattcaaaatggtttgtaaatggtaaa
acaaatatctacaaatcaactgttgaaaaatttgcaaaaacaactccaaataaaattgcg
tattattttatttcagaagatgaggccacttcagaattatcttacttgcaactagatgaa
aaagtttcaaaacttgctaatggcttaaaatctcttggtgtgggaaggggtgatgttgta
gcgatttatcttccaatgattgaagaggcaattttggcaattttagcatctgccaaaatc
ggagcaatacaaactgtaattttttcaggatatagtactgaatcattacatgttagattg
caagattgtaatgcaaaaattctttttgtttcagatggctttgtgagaaaaggaaaacca
atttctcaaaaagaacctatggaaaatgcaattttgcaaactaaggttgaaaaaacaatt
gtggtaaactacaaaggaattgacaaatatgaaaaatctgaaaatattgttttttatgat
gaactgaccgaatctcaagattcggtttgccacactgaagtaatggattctgaagattca
ctctttattttatacacctctggaactactggaaaacccaagggggttgtacatgttcat
gggggtttttctgtatttgctggtcatcaggcagcatatcttattgacttgcaggcacaa
gatgtgttgttttggccagcagacattgggtggataacaggtctggtgtggaatgtttat
ggcttgctgattatgggtgctagttctgtgatatatgatggggcattagattttccaagt
tctgacagagtgtggaagattctttcaaattataatgcaacaatttttggcatatctcct
actgcaacaagactgtttaaaaaaaataatgaagaaccattaaaaaatttctcacttgac
aaaatcaagaacatacctacaactggagaacctcttgatgaagattcttggtggtggctg
tttgaaaaagttggaaataaaaaaatcccgattatgaatctgtctgggggtactgagata
ggtggtgcaatgttgtctgtttttcctggaatgaaattaaaaccctctactgttggcatt
ccagttcctgggatagatcttgatgtggtagatgatgatgggaattctgtcaaaaacaaa
aatggttatttaatcatacgatctccttggccaggaatgaccagaggattattaaatgac
aataaacgattccttgaaacatattggtctaggtttgaaaatatttggtttcatggagat
tatgtttttgttgataatgataatctctggtatatgcggggaagaactgatgacgtcatc
aacgtttctggtcatcgtatgagtactgccgaaattgaacatactgtgatgtctcatgaa
aaaatttctgatgctgcatcggttgcaattcctgatgatttaactggagaggcaattgtt
gttttttttgtaacagataacaaaaatgattttggtttggaatctgaagtgtctgatttt
ataagtgaaaaaattggcaaattagcaaaacccaaatttgtttttcaattatctgattta
ccaaaaactagaacaggtaaaattatgcgtcggctgttaaaatccaaattacttggaaat
gatctaggagatttgtcctctcttgaaaaccctcagattttggatgaagtttccaaacta
ggttga
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