Candidatus Nitrosopumilus koreensis: NKOR_04975
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Entry
NKOR_04975 CDS
T02304
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
nkr
Candidatus Nitrosopumilus koreensis
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NKOR_04975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nkr03019
]
NKOR_04975
03012 Translation factors [BR:
nkr03012
]
NKOR_04975
Messenger RNA biogenesis [BR:
nkr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
NKOR_04975
Translation factors [BR:
nkr03012
]
Eukaryotic type
Release factors
NKOR_04975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Thioredoxin_2
LRR_13
Motif
Other DBs
NCBI-ProteinID:
AFS80881
UniProt:
K0B8W5
LinkDB
All DBs
Position
827826..829106
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AA seq
426 aa
AA seq
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MGKIEIEKQDSVKIYKIRKTLEELSNKSGRGTELITVYIPKGKQLHEIIGSLQQEQGTAD
NIKSDLTRSHVVDSLGKVIQRLKLYKKTPERGLVMFCGALPPEEGGPLGSEVVKVWEIDP
PKDLNQYLYRCDDHFHVDILKDMLKDDNLIGFLAIDAKDAGWGLLHGDKIEVLAQTGSGV
AGKHRQGGQSAKRFQKLREMELTYYFNRVAQTTREYFIDIYPVKGLIISGPGPTKEDFIN
GNYLEYRLQNNIIATIDSSYSGSEGIREAFAKSSDILGNFRLVEEKKLVEDLFREINGNT
GKGSYGLQEVIDFLKNNVVETLIITDNTNLSRVEGKCKRCKHLQEDIVERPDVIPKMTEY
SSNPCPSCKAMEVEVNEQDIVDYLELLASKTGSKLEVVSGSAEHGNMLASLGKIGAILRY
NPGHTK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaatagagatagaaaaacaagattctgttaaaatatacaaaattagaaaaaca
ttagaagaactttcaaacaaatcgggtcgaggaacagaattaatcacagtatacatacct
aaaggaaaacaacttcatgaaattattggatcacttcaacaagaacaaggtactgcagat
aatatcaaatcagatcttaccagatcacatgtagtagattctttaggaaaagtaattcaa
agactaaaactatacaaaaaaactcctgaaagaggattagtaatgttctgtggggcatta
ccgccagaggaaggtggcccattaggaagtgaagtcgtcaaagtttgggaaatagatcct
ccaaaagatttgaatcaatatctctacagatgtgatgatcattttcatgtagacattcta
aaagatatgctcaaagatgacaacctaattgggtttttagcaattgacgcaaaagatgca
gggtggggattattacatggagataaaatcgaagtgttggcccaaacaggttcaggcgtt
gcaggaaaacacagacagggaggacaatctgcaaaaagatttcagaaattaagagagatg
gaattgacatattactttaacagagtggcacaaacaacaagagagtattttatcgacatc
tatccagtaaaaggattaatcatttcaggtccaggacctacaaaagaagatttcatcaat
ggaaattatcttgaatatagattacaaaataacattattgcaacaatcgactcatcgtat
tcaggttcagaaggcataagagaggcttttgcaaaatcttcagatattttaggtaatttc
agactagttgaagagaagaaattggtagaagatttattcagagaaattaacggaaatact
ggaaaagggtcatatggattgcaagaagtaattgattttctaaaaaacaacgtagttgaa
actttgatcatcacagacaacacaaatttgagtagagtggagggtaaatgcaaacgatgt
aaacatctacaagaagatattgttgaaagaccagatgtaattccaaaaatgacagagtat
tctagcaatccttgtcctagttgtaaagccatggaagttgaggtaaacgagcaagatatt
gtagattatttagaattgttagcatcaaaaactggttcaaagttagaagtggtttcagga
agtgcagagcatggaaatatgcttgcaagtcttggaaaaattggtgcgattttaaggtat
aatccaggacacactaaatag
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