Candidatus Nitrosopumilus koreensis: NKOR_06370
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Entry
NKOR_06370 CDS
T02304
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nkr
Candidatus Nitrosopumilus koreensis
Pathway
nkr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NKOR_06370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nkr03400
]
NKOR_06370
Enzymes [BR:
nkr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NKOR_06370
DNA repair and recombination proteins [BR:
nkr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NKOR_06370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
SSV1_D-63
Motif
Other DBs
NCBI-ProteinID:
AFS81153
UniProt:
K0B4Q0
LinkDB
All DBs
Position
1061126..1061716
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AA seq
196 aa
AA seq
DB search
MNQLEKIRQNVIECTKCDLCKTRTNSVPGKGNFQSDVIFVGEAPGRNEDKNGEPFVGTAG
KKLSAALEEAGVSREKVYITNVVKCRPPNNRVPNTKERDTCREYLKKEIFIIKPKIICIL
GNTAFNSILGGSEITKFRGKLVRKDNQLYFLTIHPAATIYNQELISTLKNDIARLFDLIR
ELKNNKEIPVDIEYTS
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagttagaaaagataaggcagaatgtaatagaatgcacaaaatgtgatttgtgc
aaaaccagaacaaattctgttccaggtaaagggaattttcagtcagatgttatctttgta
ggagaagcaccagggagaaatgaggacaaaaatggagagccatttgtaggaacagcagga
aaaaaactctcagcagcacttgaggaagcaggggtttccagagaaaaagtatacatcaca
aatgttgtaaaatgcaggccgccaaacaacagagtgccaaatacaaaagaaagagacact
tgcagagaatatctaaaaaaagagattttcataataaaaccaaaaattatctgcatattg
ggaaatacagcatttaattcaattttaggaggttcagagattacaaaattcagaggaaaa
ctagttagaaaagacaaccaattgtattttttgacaattcatcctgcagcaacaatatac
aatcaagaattaatttccacattaaaaaatgacattgcaaggctctttgatttaatcaga
gaattaaaaaacaacaaagagattcctgtagatattgaatacacttcctag
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